Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0932 ATGCAAAGCGGCGATACCTATAGGTCGATTGCTTATAAGACTTTTGCCGGTCTTACCGACGAGCATTGGTTGAGCAGATTCAACCTTCTTCAACCTAACCAGATACCCGCCGGGACCCGGGTCAATGTTACAGTGAATTGCTCCTGCGGTGATGCGCACGTGTCCACGGATTACGGGCTGTTCTTGACGTATACAACTCGGCCCCGAGAGGGGTTGTCGGAGGTTGCGGCGGAGAATGGTGTTCCGGCCGTGTTGCTTCAGAGGTACAATCCTGGGTCAAATTTCAGCGCCGGCCTGGTGTTTGTGCCGGCTAGAGATGAAAATGGAAACTATCCACGATTGAAGTTTAGATCAGGTGATGATGATAAGGATAATGCACTGCTCTATTCAATAGGAATTTCTGGTGGAACTATTGCTGGTATAGTTGGTGGAAGCATTTCTGGGACCTTACTCTTGGGACTATTGTGTTTCGGGCTATGTAGAAGAAAGAGAGTGGAAGACTCATCCCTTTTCACAAATCCACTATCAGTTGAAGATAAGTATTGTTCTGGAAGCTGCTCAGAGAAGCTATCAGAATTGGTTGTTGGTGCTTCTCCTAGATTGACAGGTATTACAGTGGAGAAGTCAGTGGAATTCTCATATGAGGAGCTTGCTAAAGCTACTAATGGCTTTAGTATGGCTAATAAGATTGGACAAGGAGGCTTTGGATCTGTTTACTATGCAGAACTTCGAAATGAGAAAGTGGCGATTAAGAAGATGGATATGCAAGCATCAAAAGAATTCCTTACTGAACTGCAGGTTCTTACCCATGTCCATCACCTAAACTTGGTACGTTTGATTGGATATTGTGTTAAGAACTCCTTATTTTTGGTCTATGAGTACATTGAGAATGGAAATCTAAGCCAACATATACTTGGATCAGAGAGGGAGCCATTATCATGGCCAAGTAGAGTGCAAATAGCTTTGGATGCAGCAAGAGGACTAGCGTACATCCATGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACAAAAACTTTCGAGGAAAGGTTGCAGATTTTGGTCAGACAAATTTGACAGAATATGGAAGTTCTTCAATGCCATCACATCTTGTGGGCACTTTTGGCTATGTGCCTCCAGAATATGCAAAATATGGCGACTTTTCCCTCAAAACAGATGTATATGCATTTGGAGTTGTTCTCTATGAACTCATATCCGCAAAGGAAGCTATTGTGAAGACTACAAAAGAGCTTGTGAATGAATCAAAAGGACTAGTGACCTTGGTTTTTGAAGAAGTTCTGAATCAGCAAAACCCAGAAGAAGACCTTCGTCAACTTGTTGATCCCAGGCTCGGTGACAACTACCCTCTTGACTCAGTATATAAGATGTGTCTGTTGGCGAAAGCTTGCACACAGGGAAATCCACAAGTAAGGCCAAGCATGAGATCAATTTTAGTTGCCTTGATGATACTGTCTTCTCCAAGTGAGGACTGGGATGTGGGCTCCTTCTATGTAAACCGACCTCCCATTCATCTCGTGTCTGGAAGTTAA 1575 0.4356 MQSGDTYRSIAYKTFAGLTDEHWLSRFNLLQPNQIPAGTRVNVTVNCSCGDAHVSTDYGLFLTYTTRPREGLSEVAAENGVPAVLLQRYNPGSNFSAGLVFVPARDENGNYPRLKFRSGDDDKDNALLYSIGISGGTIAGIVGGSISGTLLLGLLCFGLCRRKRVEDSSLFTNPLSVEDKYCSGSCSEKLSELVVGASPRLTGITVEKSVEFSYEELAKATNGFSMANKIGQGGFGSVYYAELRNEKVAIKKMDMQASKEFLTELQVLTHVHHLNLVRLIGYCVKNSLFLVYEYIENGNLSQHILGSEREPLSWPSRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDKNFRGKVADFGQTNLTEYGSSSMPSHLVGTFGYVPPEYAKYGDFSLKTDVYAFGVVLYELISAKEAIVKTTKELVNESKGLVTLVFEEVLNQQNPEEDLRQLVDPRLGDNYPLDSVYKMCLLAKACTQGNPQVRPSMRSILVALMILSSPSEDWDVGSFYVNRPPIHLVSGS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0932 524 ProSiteProfiles Protein kinase domain profile. 224 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0932 524 Pfam Protein tyrosine and serine/threonine kinase 226 494 IPR001245 GO:0004672|GO:0006468
Lele34g0932 524 SUPERFAMILY Protein kinase-like (PK-like) 205 498 IPR011009 -
Lele34g0932 524 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Lele34g0932 524 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 2 510 IPR044812 GO:0019199|GO:0045087
Lele34g0932 524 Gene3D Phosphorylase Kinase; domain 1 199 294 - -
Lele34g0932 524 SMART serkin_6 224 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0932 524 Gene3D Transferase(Phosphotransferase) domain 1 295 507 - -
Lele34g0932 524 FunFam LysM receptor kinase 2 203 294 - -
Lele34g0932 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Lele34g0932 524 FunFam PTI1-like tyrosine-protein kinase 3 295 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0932 Lele-ChrLele34 18631743 18636792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0932 5 523 Receptor kinase-like Gene Family AT3G21630 56.130 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele34g0932 PK_Tyr_Ser-Thr 1.6e-43 CL0016