Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0931 ATGAAGAACAGACGATTAGTTGAGGCGAAGCGTCACACTTACTCGTTCCTCTCATACAACACAAAATCCTCAGCTTCAACCTTAGGGTTCCTCTGTTCTTCTTCTCGCCAAAATCTTAGGGCTTACAATTCATACATTCCCAATCTTATGGCGAAAACTAGACCGGGCAGAAAGGACTTGGACTCATATACCATCAGAGGTACAAACAAGGTCGTTAGAGCTGGAGACTGTGTACTGATGCGACCTTCCGACACCAGCAAGCCTCCGTACGTGGCTCGCGTGGAGAAGATCGAACAAGATAATAGGAACAACGTTAAAGTCCGTGTGAGATGGTATTATCGACCGGAAGAGTCGATTGGAGGACGCAGGCAATTCCATGGAGCGAAAGAGCTGTTCATGTCGGACCATTATGACATCCAGAGTGCTCACACCATTGAAGGGAAGTGTATTGTACACTCTTTCAAGAACTACACTAAGCTTGAGAATGTAGGAGCTGAAGATTACTACTGTAGATTTGAATACAAGGCTGCTACCGGTGCTTTCACGCCGGACCGTGTTGCTGTGTATTGCAAATGCGAGATGCCTTATAACCCGGACGACCTCATGGTGCAATGTGAGGGGTATCATCCTGCGTGTGTGGGCATGACTATCGAAGAAGCAAAAAAGCTGGACCATTTTGTATGTTCTGAATGTTCTTCTGATGATGACATGAAAAAACCGCAAGCTACATTTTCTGCATCACCAGCATCCGATGGCAAGGTTTATCATGTGCTCTTTAGCATGAGGTTATCACTAATTGCTTGTCGATATGAACTGGCAGGTGGAGCCCAAGCGGCGGAAGAGATGACCGTTTGTGGGTACAAGACTGTCAGAAGACATGACTGCTGTTGTGAGTGTGTTGTAAAGCTTCGACCAGAGGCTACGGAACATGTTTATGTATCTGACTCTCTTATGTATGTATCTGTGTTTATTAGATCCCATGAGATTTGA 990 0.4556 MKNRRLVEAKRHTYSFLSYNTKSSASTLGFLCSSSRQNLRAYNSYIPNLMAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFMSDHYDIQSAHTIEGKCIVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPASDGKVYHVLFSMRLSLIACRYELAGGAQAAEEMTVCGYKTVRRHDCCCECVVKLRPEATEHVYVSDSLMYVSVFIRSHEI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0931 329 ProSiteProfiles BAH domain profile. 70 185 IPR001025 GO:0003682
Lele34g0931 329 SUPERFAMILY FYVE/PHD zinc finger 181 235 IPR011011 -
Lele34g0931 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 247 IPR013083 -
Lele34g0931 329 Pfam BAH domain 72 184 IPR001025 GO:0003682
Lele34g0931 329 PANTHER OS08G0421900 PROTEIN 50 253 - -
Lele34g0931 329 SMART PHD_3 189 232 IPR001965 -
Lele34g0931 329 CDD BAH_BAHCC1 71 205 - -
Lele34g0931 329 Gene3D - 30 181 IPR043151 -
Lele34g0931 329 SMART BAH_4 70 185 IPR001025 GO:0003682
Lele34g0931 329 FunFam Chromatin remodeling protein EBS 43 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0931 Lele-ChrLele34 18624381 18628662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0931 90 187 Core DNA Replication Machinery Family AT4G14700 30.303 1.36e-09 57.4