Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0923 ATGAGTCAGCTTGGAGTAATCTTGCGGGAATCGCTTCAGAGGGGCCGAGAGGAAAGAACAATACTGGGTTTGTTAACGGAGCAAATGGAATCTGTGAATAGGAATAATCATGACGATAGAGAGCCTCGAAGGAGACTGAGTTTAAAAGAACGGCTAAGATTCACCAGCATGGGGTGTTGTGGGGCCACCTGGGGTTTCGGTCCGACCTCCGTAAGGCACGATGAAGGAGATGAAGAAGAAGGAGACGAACGGCGGCAGCAGCAGCAAAGGCTCCAAGAGACAAATCCGGGTCAAAGATCGAGCTCGTCAGACCCGGATTGTTTGAGCCCGAACCCATCGGGTTCGGGTATGAATCTCGCGGCTGCGTTGGCGGCGGAGCGTCAATTTCGGGGCACTCAAGAACCAGAAACTCAGAGGCAAGGAACCTCCAGGAACAATTTCCGGCGGGGAGGAGTTGGAGCGGCGCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTACAGGAAGGTGAGGGAGGCGACGCTGAAGTAACGGTGACTGTGACGGAGAACGGAGGAGGGGGCAATGATACGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACTTTTTGCAGAGTGTGCTCCAGAGAGCTGTGGCTGAACCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCCAGATTCTCGACATCTTCTGA 729 0.5528 MSQLGVILRESLQRGREERTILGLLTEQMESVNRNNHDDREPRRRLSLKERLRFTSMGCCGATWGFGPTSVRHDEGDEEEGDERRQQQQRLQETNPGQRSSSSDPDCLSPNPSGSGMNLAAALAAERQFRGTQEPETQRQGTSRNNFRRGGVGAAPGTPWRVSLMRLLQEGEGGDAEVTVTVTENGGGGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILQILDIF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0923 242 MobiDBLite consensus disorder prediction 71 89 - -
Lele34g0923 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 241 IPR013083 -
Lele34g0923 242 CDD RING-HC 194 231 - -
Lele34g0923 242 SUPERFAMILY RING/U-box 188 238 - -
Lele34g0923 242 SMART ring_2 194 231 IPR001841 -
Lele34g0923 242 MobiDBLite consensus disorder prediction 64 156 - -
Lele34g0923 242 Pfam Zinc finger, C3HC4 type (RING finger) 191 237 - -
Lele34g0923 242 MobiDBLite consensus disorder prediction 90 116 - -
Lele34g0923 242 ProSiteProfiles Zinc finger RING-type profile. 194 232 IPR001841 -
Lele34g0923 242 PANTHER OS01G0917900 PROTEIN 5 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0923 Lele-ChrLele34 18541212 18541940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0923 21 242 C3H Transcription Factor Family AT4G22250 45.923 1.26e-52 168