Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0920 ATGACGTTGGATATCTCCAACGGCGAGTTTTTGCGCATGGCGAGCGAGGCTCCGGAATCCTTCACCGTCGGTATGCCGCAGCCGCGGACATCTGTCGAGAACGGAGACGGTAACGGAACGGGTGGGGAGGGGATGTTGATGCCTCCCCTGAACTTCGGGATGGTCGATTATGGCATTTTTAGGTCTGGCTTTCCTGATTCCGCCAGCTTCGGATTCTTGAAATCCCTTCGCCTCCGTTCCATTATATGTTTGTTCCCTGATGAGTATCCAGAAGCCAATTTAGAGTTCTTGAAGGCTAATGGAATAAGGCTTTATCAATTTGGAATCGATGGCTCTAAGGATCCTTTGACAAAAGTCCCCGAAGATACAATTCGTGAGGCATTGGAACTTATCCTAGATGTTGGGAACCATCCATTGCTCATTCATTGCAAGAGAGGGAAGCATCGCACTGGTTGCCTTGTGGGATGCTTAAGAAGATTGCAAAGATGGTGTCTACCATCCATTTTTGATGAGTATCGAAGTTTTGCAGCTGCCAAAGCCAGGGTTTCAGATCAGAGTTTCATAGAAATGTTTGATATTTCTGGTTTTAAACCCCAGCCATTGTCATTTTCATCCTCACAAAAATACAGTATTGACGAAGTCCAGGATGCTGTTCCATCCTCCCCCTGA 669 0.4694 MTLDISNGEFLRMASEAPESFTVGMPQPRTSVENGDGNGTGGEGMLMPPLNFGMVDYGIFRSGFPDSASFGFLKSLRLRSIICLFPDEYPEANLEFLKANGIRLYQFGIDGSKDPLTKVPEDTIREALELILDVGNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLPSIFDEYRSFAAAKARVSDQSFIEMFDISGFKPQPLSFSSSQKYSIDEVQDAVPSSP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0920 222 PANTHER TYROSINE-PROTEIN PHOSPHATASE 46 197 - -
Lele34g0920 222 FunFam probable tyrosine-protein phosphatase At1g05000 45 195 - -
Lele34g0920 222 Pfam Tyrosine phosphatase family 46 201 IPR004861 -
Lele34g0920 222 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 205 IPR020422 GO:0006470|GO:0008138
Lele34g0920 222 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Lele34g0920 222 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Lele34g0920 222 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Lele34g0920 222 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Lele34g0920 222 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Lele34g0920 222 CDD PFA-DSP_Siw14 45 192 - -
Lele34g0920 222 Gene3D Protein tyrosine phosphatase superfamily 45 195 IPR029021 -
Lele34g0920 222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 192 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0920 Lele-ChrLele34 18502093 18504455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0920 25 210 Protein tyrosine phosphatase (PTP) family AT4G03960 61.290 2.24e-85 249