Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0879 ATGCATAGGAGGAACCAAGTGACAGCTTGCATCCTTTGCACATTAAGACTATTTAGAAGGCAAACCCACATGGAATACCAGTTTTCTAATTTCTTGCTCCTTATTATTTCCTTCATCTTCTTCTTCTTGACGATCCTTTGGCTTGTAAGGCCAAAAGACAAAACTAAGATTGAAGTTCCAGGGCCATGGAAGCTTCCTGTTTTGGGAAACCTTCATCAGTTAGCAGCAGCAGAGTCAGCACTTCCACACCAGGCCCTTAGAGAGCTATCTCTCAAGCATGGACCTCTCATGCATCTTCAACTTGGTGAGATTTCAACTGTGATTGTTTCATCCCCAGATATCGCCAAGCAGATTATGAAGACTCATGATCTTAGTTTTGTTCAGAGGCCACAAGTTTCTCTTGCTGGTAAGATTTTTTCTTATGGAGGAACTGATATTGTTTTTGCTCCTTACGGTGATTACTGGAGACAGATGAGGAAAGTATGTGTTTTAGAGCTTTTAAGTGCCAAGAAGGTTGAATCATTCTCCTATGTACGACAAGATGAGGTATCTAAGCTGATAGAGTCAGTTGAATCATCAGTAGGTTCGATTTTCGATCTCACGAGTAAAATTTACTCATTGACTAGTTCTATAGTTATGAGGGTCGCATTTGGCGACAAGCATGAAGGTCAAGAACAGCTATTGAAAGTGCTCAATGTAGCATTAGAACGAATGGGTGGGTTTAATCTTGCTGATTTGTTTCCTTCCATGAACCTTATTCATCGCATTACTGGAATGGAAGCAAAGTTGCTGAAGATCCAGAAGAATGCGGACAAAATTTTAGATGATATTATCAAGGAGAATCAACAGAAGCAGATAATAAGAGCAGAAGAAGGAGGCAAGATTAGTGCTTCGGAGGAAGAAAATCTCGTTCAGGTTCTTCTACGAATCCAGCAAAGTGAAAACCTTGACGTTCCAATTACAAACGACAACATCAAAGCTGTTATTTGGGATATGTTCACTGGTGGAACTGATACTTCGGCAACAGTACTAGAATGGGCCATGTCAGAAATGATGAGAAATCCTAAAGTGATGGAAAAGGCACAAGCGGAGGTTAGAAACGTTTTCAAAGGGAAGAAAGTGATTCATGAAAGTGATATGATGCAACTTAGTTATTTGAAATCAGTAATCAAAGAAACTTTGAGGTTGTACCCACCTGTTCCTTTGTTGGTTCCAAGAGAATGCAGCGAAACTTGCAAGATTAATGGCTATGAAATACCCATCAAAACCCAAATTATAATAAATGCATGGGCACTTGGAAGAGATCCAAATTATTGGTACGATGCTGAGTGGTTTATACCAGAGAGGTTTCAAGGCAATTCTGATATTCATTTCAAAGGAACAAACTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGAATGTGTCCAGGAATTTCATTTGGTTTAGCAAGCGTTGAGCTTCCTCTAGCGAGCTTACTCTACCACTTTGATTGGAAACTCCCACATGGAATGGAACCAGAGGATTTAGATATGACTGCAGATTTTGGCATCACAAATAGAAGGAAGAACAAGTTGTGTTTGATTCCCACACCATACAAAATTGATTCGGTTATTAATTGA 1620 0.3963 MHRRNQVTACILCTLRLFRRQTHMEYQFSNFLLLIISFIFFFLTILWLVRPKDKTKIEVPGPWKLPVLGNLHQLAAAESALPHQALRELSLKHGPLMHLQLGEISTVIVSSPDIAKQIMKTHDLSFVQRPQVSLAGKIFSYGGTDIVFAPYGDYWRQMRKVCVLELLSAKKVESFSYVRQDEVSKLIESVESSVGSIFDLTSKIYSLTSSIVMRVAFGDKHEGQEQLLKVLNVALERMGGFNLADLFPSMNLIHRITGMEAKLLKIQKNADKILDDIIKENQQKQIIRAEEGGKISASEEENLVQVLLRIQQSENLDVPITNDNIKAVIWDMFTGGTDTSATVLEWAMSEMMRNPKVMEKAQAEVRNVFKGKKVIHESDMMQLSYLKSVIKETLRLYPPVPLLVPRECSETCKINGYEIPIKTQIIINAWALGRDPNYWYDAEWFIPERFQGNSDIHFKGTNFEYIPFGAGRRMCPGISFGLASVELPLASLLYHFDWKLPHGMEPEDLDMTADFGITNRRKNKLCLIPTPYKIDSVIN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0879 539 PANTHER OS08G0105600 PROTEIN 85 533 - -
Lele34g0879 539 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 Pfam Cytochrome P450 60 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 SUPERFAMILY Cytochrome P450 60 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele34g0879 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Lele34g0879 539 FunFam Cytochrome P450 71D8 52 529 - -
Lele34g0879 539 Gene3D Cytochrome P450 52 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0879 Lele-ChrLele34 18213554 18217407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0879 34 530 Cytochrome P450 AT5G25120 43.083 8.18e-139 409