Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0855 ATGGACGACCTCTTACCCGTCGACGATTTCCCTTACCACGTGGCCCCATTTCCCGATACCTCTGACCTCCTTTACACCCACCCCGCTCCGGCTTTTCACCCTGCCGACGTCGCTGACCACCGTCGGCTTCTTAACCCCGTTCCACAGAAGCTCCGGCCCATCCGAAGCCTTGACCGGTCTTCTTCGCCGCCGTCACTAGTCACCGAGATTCCTGAGAATGGACCGTTCGCCGGAGCGTCTAACGATGTGGGTTACCTTTGTCATCATTCAAGTCAGAATCTTGAGTTTATTGATCAGCGAGTTGAGTCTTGCGAGGAGCTGAGGAAGGAAGCTGCCGATGATGTTTCCGGAAATGATTTCCTTCAGAAGGAGACTCCCGCGGGGCTCCGAAAGTGTCATACTTGTGACCCGAATGCCGATGGGTTTAAGTTGAAGCAGGAATATGGTTCATCTTGGGACAATGATGATGATTCATCTGAAAGCGTGGAAGAACCCAGGAGTGGGAAGAAAAGAGAGAAGACGGTCACAAAGTTTGAAGCTTTTCTAGAAAATTTGGCGACGAAGGTGATGGAAAAGCAAGAGCAGATGCACAAGCAACTGCTGGATATGATAGAGGAGAAAGAAAGGGAAAGAGCTATGAGTGAAGAAGCTTGGAAACAAAAGGAGATGGAGAGAATTAAAAAGGATGAGGAGGCCAGAGCCCAAGAAAAATCTAACAACCTGGCTCTGATAGCATTAATTCAGAATCTACTGGGCCATGAAATTCAAATCCCCCAACTAGCAGCAACCAGCTCAAGAGAGGAGGATGAAGAAAAAGGCGAAGCGAACATCCAAAAAGATTTCAAGAGTGATCAGAGTAACAATAATAGATGGCCAGAAGCTGAAGTGCAAGCGCTAATAACTCTAAGAACTTCCTCGGAACATGAATTTCGAGGCACGGGATCCAAAGTATCTCTATGGGAGGAGATGTCTAAAGCAATGCATAATATGGGTTACAATCGTTCTGCGAAGAAGTGCAAGGAGAAATGGGAAAACATCAATAAGTATTATAAGAAAACGATGGAGAGTAGGAAGAAGCAACGACTAAATAGTAAAGTTTGCCCATACTTTGATGAGTTGGACATGCTCTACCGAAATCGGCTCCCGAATATAGGGAATGCCTTGAGCGACACCTCTATGTCATCAAAGACCGGAAAGGAATAA 1203 0.4672 MDDLLPVDDFPYHVAPFPDTSDLLYTHPAPAFHPADVADHRRLLNPVPQKLRPIRSLDRSSSPPSLVTEIPENGPFAGASNDVGYLCHHSSQNLEFIDQRVESCEELRKEAADDVSGNDFLQKETPAGLRKCHTCDPNADGFKLKQEYGSSWDNDDDSSESVEEPRSGKKREKTVTKFEAFLENLATKVMEKQEQMHKQLLDMIEEKERERAMSEEAWKQKEMERIKKDEEARAQEKSNNLALIALIQNLLGHEIQIPQLAATSSREEDEEKGEANIQKDFKSDQSNNNRWPEAEVQALITLRTSSEHEFRGTGSKVSLWEEMSKAMHNMGYNRSAKKCKEKWENINKYYKKTMESRKKQRLNSKVCPYFDELDMLYRNRLPNIGNALSDTSMSSKTGKE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0855 400 CDD GT1 289 353 - -
Lele34g0855 400 PANTHER FI21293P1 131 387 - -
Lele34g0855 400 Coils Coil 190 240 - -
Lele34g0855 400 Pfam Myb/SANT-like DNA-binding domain 289 375 IPR044822 -
Lele34g0855 400 SUPERFAMILY Homeodomain-like 288 368 IPR009057 -
Lele34g0855 400 MobiDBLite consensus disorder prediction 261 290 - -
Lele34g0855 400 MobiDBLite consensus disorder prediction 264 279 - -
Lele34g0855 400 FunFam Trihelix transcription factor GT-2 291 352 - -
Lele34g0855 400 MobiDBLite consensus disorder prediction 146 172 - -
Lele34g0855 400 Gene3D - 291 352 - -
Lele34g0855 400 ProSiteProfiles Myb-like domain profile. 283 347 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0855 Lele-ChrLele34 18053983 18056187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0855 167 379 Trihelix Transcription Factor Family AT5G47660 41.410 4.58e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele34g0855 Myb_DNA-bind_4 7.7e-21 CL0123