Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0830 ATGGCAGACGAATATAATACCACTTGCTGGTCTTTTCTGGACTTTCGACAGTTCTATGATGCCAAGCTTAATGAGAAGTTGTTGGAGAACGGCGAGAGGGTAGATATGCAGGTCGGTAATGTGAATTCTTCGGGCGTTATGTCCAATGGCAACAATCATGCCAAAAGGACTCAGGAGACGACAATCTTTGAACAGTTTCAAAGCCAGGGGCAAAATTCAACTCATTCGAATGGATTTTCATCAAATCATCTGGATGAAAGACCGCAAAAGCCTTTACTTCCACCTTTTGAATCAGCTGATAGGCGTGCTTTAGGAGAGAGTTTATGCAGGGATATTATTCGTGGGAGCCCAGATGTTAAGTGGGAAAGCATCAAGGGGTTAGACAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATTAAATATCCCAAGTACTTCACTGGTTTATTATCACCGTGGAAAGGGATTCTTTTGTTTGGCCCACCTGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAAACTACGTTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCTGAGAAGTTGGTGAGGGTGTTATTTGAGTTAGCTCGGCACCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCAGTGAGCATGAAGCAAGTAGACGGCTTAAGACTGAGCTACTCATACAGATGGACGGTTTGACAAAAACCAATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTCGTACCACTTCCAGAACCAGAAGCAAGAAGAGCAATGGTTGAGGAACTCCTTCCCCAAAATGATGGCGAGGAGCAGATTCCCTATGATTTCATGGTGGAGGAAACAGAAGGATATTCAGGCTCAGATATCCGGTTACTGTGTAAAGAGGCTGCAATGCAGCCCTTGAGACGCGTGATGTCACAACTTGAACAGAGAAAAGAGGTGGTGCCTGAAGAAGAGTTGCCAAGAGTTGGGCCAATAAGAGCAGAAGATATAGAGGTAGCTTTGAAGAACACACGACCATCTGCTCATCTGCAAGCCCCCAAATACGAAAAGTTCAATGATGATTACGGTAGTCAAATTCTACATTGA 1209 0.4417 MADEYNTTCWSFLDFRQFYDAKLNEKLLENGERVDMQVGNVNSSGVMSNGNNHAKRTQETTIFEQFQSQGQNSTHSNGFSSNHLDERPQKPLLPPFESADRRALGESLCRDIIRGSPDVKWESIKGLDNAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMVEELLPQNDGEEQIPYDFMVEETEGYSGSDIRLLCKEAAMQPLRRVMSQLEQRKEVVPEEELPRVGPIRAEDIEVALKNTRPSAHLQAPKYEKFNDDYGSQILH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0830 402 Gene3D - 290 378 - -
Lele34g0830 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 384 IPR027417 -
Lele34g0830 402 PANTHER AAA DOMAIN-CONTAINING 60 398 - -
Lele34g0830 402 Gene3D - 117 393 IPR027417 -
Lele34g0830 402 Pfam ATPase family associated with various cellular activities (AAA) 158 288 IPR003959 GO:0005524|GO:0016887
Lele34g0830 402 MobiDBLite consensus disorder prediction 67 96 - -
Lele34g0830 402 MobiDBLite consensus disorder prediction 67 84 - -
Lele34g0830 402 FunFam Katanin p60 ATPase-containing subunit A-like 2 117 303 - -
Lele34g0830 402 CDD AAA 125 289 - -
Lele34g0830 402 Pfam AAA+ lid domain 319 351 IPR041569 -
Lele34g0830 402 SMART AAA_5 154 291 IPR003593 -
Lele34g0830 402 FunFam Katanin p60 ATPase-containing subunit A-like 2 290 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0830 Lele-ChrLele34 17836057 17841489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0830 152 361 Calmodulin-binding Proteins AT3G56690 35.211 1.34e-30 122