Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0811 ATGGTTTCCCGAAATCAACCCAAAGATGACATCCCTAAGAAGCAATGGTCCTTGAGAGACTTCGAGATCGGAAAACCCCTCGGAAAGGGGAAATTCGGTAGAGTCTACGTCGCTCGAGAAGTCAAGAGCAAATATATTGTGGCGCTCAAGGTTATCTTTAAGGAACAAATGGAAAAGTACAAAATTCATCATCAACTGAAGAGAGAGATGGAGATTCAAACCAGTCTTCAGCACCCCAACGTTCTGCGTCTCTATGGTTGGTTTCATGATGCTGAATGGATTTTCTTGATACTTGAGTATGCTCATAATGGTGAGCTTTACAAGGAGCTCAGAAAAAAAGGTTATCTCAATGAGAAGCAAGCAGCCACGTATATTTTGAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTCATTCATAGGGATATAAAGCCCGAGAATTTGTTACTTGACCATGAGAATTCCAAGCATGTAAAGTTTGCAATTTCTTCCAAAATGACATTTGCATCTCTGGCCTCATTTGGGCTTCGTTTGAAAATTCATTTTCTTTTCCTGAAATTTGACATGTGCATGGAAGGTCGCCTTAAAATTGCAGATTTTGGTTGGTCTGTACAGACAAGAAGTAAGAGACATACCATGTGTGGAACATTGGATTATCTAGCACCAGAAATGGTAGAAAACAAAGAACATGATTTTTCTGTTGATAACTGGACTCTGGGTATACTTTGTTATGAATTCCTCTATGGTTCTCCCCCATTTGAGGCTGAGAGTCAAGTTGACACATTCAAGAGGATAATGAAGATTGATCTAAATTTCCCTTCTACTCCTACTGTTTCTTCGGAAGCCAAAAATCTGATTAGCCGGCTCTTGGTGAAAGATTCCACTAGAAGGCTATCACTTCAGAAGATTATGGAGCATCCTTGGATACTCAAGAATGCTGATCCTACGGGTGTCTGCAATAAATAG 972 0.4033 MVSRNQPKDDIPKKQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYIVALKVIFKEQMEKYKIHHQLKREMEIQTSLQHPNVLRLYGWFHDAEWIFLILEYAHNGELYKELRKKGYLNEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHENSKHVKFAISSKMTFASLASFGLRLKIHFLFLKFDMCMEGRLKIADFGWSVQTRSKRHTMCGTLDYLAPEMVENKEHDFSVDNWTLGILCYEFLYGSPPFEAESQVDTFKRIMKIDLNFPSTPTVSSEAKNLISRLLVKDSTRRLSLQKIMEHPWILKNADPTGVCNK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0811 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lele34g0811 323 Gene3D Transferase(Phosphotransferase) domain 1 105 320 - -
Lele34g0811 323 CDD STKc_Aurora 20 312 - -
Lele34g0811 323 Gene3D Phosphorylase Kinase; domain 1 10 104 - -
Lele34g0811 323 ProSiteProfiles Protein kinase domain profile. 21 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0811 323 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Lele34g0811 323 FunFam Aurora kinase A 13 104 - -
Lele34g0811 323 PIRSF ILK 2 175 - -
Lele34g0811 323 PIRSF ILK 179 312 - -
Lele34g0811 323 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 322 IPR030616 GO:0004672
Lele34g0811 323 SUPERFAMILY Protein kinase-like (PK-like) 13 315 IPR011009 -
Lele34g0811 323 SMART serkin_6 21 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0811 323 Pfam Protein kinase domain 21 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0811 Lele-ChrLele34 17713893 17716374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0811 21 317 CBL-interacting serine-threonine protein kinases AT5G10930 36.513 2.12e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lele34g0811 Pkinase 1.1e-69 CL0016