Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0792 ATGGGAGCCGTCGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGTGAGGTTACTGACCCACTCTACCCAGGTGGAAGCTTTGATCCATTGGGCTTGGCCGACGACCCAGAGGCTTTTGCCGAGTTGAAGGTGAAGGAGATCAAGAACGGTAGGTTGGCTATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTGACAGGAAAGGGCCCATTGGAGAACCTTGCCGACCATCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTATGCCACAAACTTCGTCTGGAAATGGAGTCAGAAGATGATGAGGAGGAGGATTCTGAGGAGGACTCAGAAGAAGAGAAGGGAAAAGACATGGGAGGAGTTGGAGAGGGAAGCCAGCAATGCAGATAGGGAGAAAGGTGATGAGTCCGACAGCGAGGAAGAGAGGAAAAGAAGGAAGATGAAAGCGCTTTTGCGCAAGCCTGGAGTTGCCGATAAATATATCTGTAGGCACTTTGTGGGATCCTTGAATGCAACTTTCTTGGTTAAAATTGATTTCGACATATTAAACTCGATGTCTTCACAATCGCGTGAAGTTTTGTTTTCGTTTTTATCGGATGGAGATTTTGAGAACATTAACTACCTAGTTTCCATGGCCAACAACCCATCACAGCTTCTGCCATCAGAGTTGATTGACCGGTGTATAGGATCAAAACTATGGGTGATAATGAAAGGAGATAAGGAGCTTGTTGGTACTCTCAAAGGCTTTGATGTCTATGTCAACATGGTGCTTGAAGATGTTACTGAATATGAGATCACTGCTGAAGGGAGACGGATAACAAAGCTGGATCAGATTTTACTCAATGGAAACAACATTGCCATTTTGGTTCCTGGTGGTTCACCTGATCCAGAATGA 900 0.4611 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVWKWSQKMMRRRILRRTQKKRREKTWEELEREASNADREKGDESDSEEERKRRKMKALLRKPGVADKYICRHFVGSLNATFLVKIDFDILNSMSSQSREVLFSFLSDGDFENINYLVSMANNPSQLLPSELIDRCIGSKLWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0792 299 CDD LSm5 219 294 IPR033871 -
Lele34g0792 299 Coils Coil 113 133 - -
Lele34g0792 299 Gene3D - 221 297 - -
Lele34g0792 299 FunFam U6 snRNA-associated Sm-like protein LSm5 221 296 - -
Lele34g0792 299 Gene3D Chlorophyll a/b binding protein domain 1 91 - -
Lele34g0792 299 SUPERFAMILY Chlorophyll a-b binding protein 1 95 - -
Lele34g0792 299 MobiDBLite consensus disorder prediction 118 143 - -
Lele34g0792 299 Pfam LSM domain 225 292 IPR001163 -
Lele34g0792 299 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 95 IPR001344 GO:0009765|GO:0016020
Lele34g0792 299 SMART Sm3 224 292 IPR001163 -
Lele34g0792 299 SUPERFAMILY Sm-like ribonucleoproteins 220 293 IPR010920 -
Lele34g0792 299 Pfam Chlorophyll A-B binding protein 1 64 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0792 Lele-ChrLele34 17573275 17578678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0792 1 95 Chloroplast and Mitochondria Gene Families AT2G34430 91.667 3.69e-56 181