Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0770 ATGGAAATGGATCAATCAGAGTCGCAAGCTTATCTTCGATATGTTGAAGAGAAACTGCTAAATGACGACGATGACTTAATGCTAGAGAATGAAGCAGCTCATCTGGCAGCTCCAGTCCCCTCCACATACTCAAACACTTGGCCCTCCAACTGCAATTCGGAGTATCATAACACATTGAACTTAGATCCACCAAATAATATCTCATGTGCTTTACCTGCTGATCAACAAATTCAAATTCCTCATTCAGCAACTCCTCAAATCCATACTTCTCCTTCGCCAAACCCATCAAATCTTTTAAGTGTTCCAGTGCATCGTCCTAGTGAGGTGGTGACAGAAACACCAACTCAAGTAGCTAGTCATCCTCAAGAACACTTTTATAATCAAACTAATGATGACCATGTGCATCAGAACCTGATTCCTTATTCAGCTCCTCAACAATATACTATTCCTTCAGGATCAAGTCTTATGATGCCTCCAATACATCAATTTAACCAACGGAGTCTTTCAAATGTTCCAATGAATCAGCCACAACCATTAAATGGTCAATTTAACTCCCAAGTTCCTTATAATTTCCCAGTGCATCAGTCACCTCCGATGGATGAATTTATCCCTCAAGTTCCTTCAGCTGTTCCAATGCAAATGCAACTTCCTATGAATCAGTCTAGCCAACAAAATATCACACAATTGGCCCCTAGCATGCCGGCGAGATCGGTCCACCACCAACCACATCAGATGTCACCGGCGATGACAATGTTCCCTAACTTTCCATCATCCGGCCCTTTTCATCATCATTCAACTCCTCAAGACCACATTGTTTATTCAGTTCCTCCAATACAGCAATGGAACCTACAAAATCCATCTAATGGGGTTCAATACAACCCACAACCATCTCATGAGCTACTGCCACTTACATCACCGCCTGAGTTTTCATCAGACCCATGGCTCTCTAATAGGCAACACTTGTTGAATCAGCCTTCCTTTATTAACTCGGAAGCACCAATAAATATTTTTCAAACCAATACCAACAAGGGAAAGTTTTGGAGTGAAGACGAACATAGGCGATTTCTAATTGGATTGCTACAGTACGAGAAGGGTGATTGGAAGAACATTTCTGAGATTGTGAAGACAAGGACACCAACTCAGGTTGCTAGCCATGCTCAAAAATTCTATGAGCGCCGAGATAGGAATGCAAATGAAACAAGAAAAAGAATAAGAAGAAGCATCCTCGATATCACCGATCCTTATGCTTTTCCCTAA 1257 0.4161 MEMDQSESQAYLRYVEEKLLNDDDDLMLENEAAHLAAPVPSTYSNTWPSNCNSEYHNTLNLDPPNNISCALPADQQIQIPHSATPQIHTSPSPNPSNLLSVPVHRPSEVVTETPTQVASHPQEHFYNQTNDDHVHQNLIPYSAPQQYTIPSGSSLMMPPIHQFNQRSLSNVPMNQPQPLNGQFNSQVPYNFPVHQSPPMDEFIPQVPSAVPMQMQLPMNQSSQQNITQLAPSMPARSVHHQPHQMSPAMTMFPNFPSSGPFHHHSTPQDHIVYSVPPIQQWNLQNPSNGVQYNPQPSHELLPLTSPPEFSSDPWLSNRQHLLNQPSFINSEAPINIFQTNTNKGKFWSEDEHRRFLIGLLQYEKGDWKNISEIVKTRTPTQVASHAQKFYERRDRNANETRKRIRRSILDITDPYAFP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0770 418 SMART sant 343 392 IPR001005 -
Lele34g0770 418 PANTHER TRANSCRIPTION FACTOR KUA1 342 413 - -
Lele34g0770 418 CDD SANT 347 389 IPR001005 -
Lele34g0770 418 Pfam Myb-like DNA-binding domain 347 388 IPR001005 -
Lele34g0770 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 343 392 IPR006447 GO:0003677
Lele34g0770 418 Gene3D - 345 395 - -
Lele34g0770 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 339 394 IPR017930 -
Lele34g0770 418 SUPERFAMILY Homeodomain-like 341 393 IPR009057 -
Lele34g0770 418 ProSiteProfiles SANT domain profile. 347 394 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0770 Lele-ChrLele34 17408554 17409911 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele34g0770 Myb_DNA-binding 8.9e-08 CL0123