Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0751 ATGTTTATTTACCCTCTAATTCCTCTTAATACCGATATATCTGTTTTTGCTGGGACCATGCCTCGTAAGGTGAATTATGGACTTGATTTCGATGATGATTACGATGACTATGAAGAGTATGACTATGATGTTGAAACAGAAGAATATGGAGAAGAACCTGGACCTGTTAAAAAGCAAGAGACTAAAGGGATTTGGAGATGCTCTATTTGCACTTACAACAACGAAGAGGGGATGAATGTATGTGATATTTGTGGTGTTGTGCGTCATCCTTTGGTTAACACAGGAGCTTCTGACAATAACAAAACAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTCTACTGGATTGCGGTCTTCCAAAATGGGATTGAAAGGGACAGTTGCAGACACTAGAAGTTTAAATAATGAACCGAAAGTACAGTCAAATAGTGAAAGTTCAGATGGTTCATCTTTAGTTCAGAAGGGCAGGCAGGATATTTTTGCTGAGAACAAGCATTCTAAAGATGTAGCATTTAACCAGGAAATAAGTGATAAAACTTCAAGTAGCTTACCAGCATCTTCTGCGAAGGCTGAAGCTAAAATGAGTAAAATCAAGTCTTCCAATGATGGCAAATTTGATATTCAATCCAATGAAGAATTGTCGAATAGTTTGTCTGCACTGCTGAAAGTCAGAGACGGAGGTGGTGAAATTCATTGCTCTTCTATCAAAGATGTTGAATCTCAAAGTAGTTCTGAGAACATAGCTCTTGATGTAAGAACAGGAAAATCAGATAATACTATTTCTAAAGGACCACATCCGCAAATGCCGTATAAACCAGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTCTCAGGTAGACTACTGCACCTGTCAGGACGAATTACACAGAAAGAAATGCACAAATATGAAAAGGAAGCCAAATTACAGGGTAAGGGATCCTTTGCTTATGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACCAAGAAATATCATGTTGTTGTGCTCGACTCCCCAGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACGCAAGCTGATGCGGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAGCTTATTAGAAGTTTTGGTGTTGACCATGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGCGAGTGTTTCTACGGACATGTGGTTTTAAAGATTCTTCTGTGTCATGGATTCCCATGAGTGTCGTAGAAAATCAAAATTTGGTGGTATCTCCTTCTGATGCTCGTTTCAAATCCTGGTACAAAGGACCGTATTTGTTAGATGCAATTGATTCACTACAACCTCCAACTAGAGAATTCTCAAAGCCTCTACTAATGCCAATATGTGACATTATCAAGTCACCAACACTTGGACAAATCTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTAGAGCGTGATTCTAATGCCTGCACTATTGTAAGAGCTGGGGATAATGTAGCTGTCACGTTGAATGGTGTAGATGTAAGTCATGTAATGCCAGGAGGAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATCCCATATTGGTAGGATCACAGTTAGAGTTTCATATACACCATGCCAAGGAGCCTGCTAAAGTTTCAAAAATATTGTCAGTACTTGATCCAAAGACCGGGAAGGTGATAAGAAAGTCCCCTCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTTGAGGTAATGTTGCAAGAGCCAGTGTGTGTGGTTGAATCATCTAGTTGTAAAGCTCTTGGAAGGGTGTCTTTAAGAACATTAGGAAGAACAATCGCTGTTGGACTTGTGACCCGAATAATTGGAGAGCAAGAATGA 2163 0.4022 MFIYPLIPLNTDISVFAGTMPRKVNYGLDFDDDYDDYEEYDYDVETEEYGEEPGPVKKQETKGIWRCSICTYNNEEGMNVCDICGVVRHPLVNTGASDNNKTAPFKFDVPSPDDVVSTGLRSSKMGLKGTVADTRSLNNEPKVQSNSESSDGSSLVQKGRQDIFAENKHSKDVAFNQEISDKTSSSLPASSAKAEAKMSKIKSSNDGKFDIQSNEELSNSLSALLKVRDGGGEIHCSSIKDVESQSSSENIALDVRTGKSDNTISKGPHPQMPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDHVIVAINKMDAVGYSKDRFDLIRQQLRVFLRTCGFKDSSVSWIPMSVVENQNLVVSPSDARFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPICDIIKSPTLGQISACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSNACTIVRAGDNVAVTLNGVDVSHVMPGGVLCHPDFPVKVASHLELKVLVLEGANPILVGSQLEFHIHHAKEPAKVSKILSVLDPKTGKVIRKSPRCLIAKQSAVVEVMLQEPVCVVESSSCKALGRVSLRTLGRTIAVGLVTRIIGEQE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0751 720 Pfam Elongation factor Tu GTP binding domain 292 508 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 Gene3D - 280 513 IPR027417 -
Lele34g0751 720 MobiDBLite consensus disorder prediction 127 157 - -
Lele34g0751 720 SUPERFAMILY Translation proteins 514 607 IPR009000 -
Lele34g0751 720 PRINTS GTP-binding elongation factor signature 372 382 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 PRINTS GTP-binding elongation factor signature 352 360 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 PRINTS GTP-binding elongation factor signature 293 306 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 PRINTS GTP-binding elongation factor signature 388 399 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 PRINTS GTP-binding elongation factor signature 433 442 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 534 IPR027417 -
Lele34g0751 720 CDD EF1_alpha 293 512 - -
Lele34g0751 720 ProSiteProfiles Zinc finger RanBP2 type profile. 61 90 IPR001876 -
Lele34g0751 720 SUPERFAMILY Ran binding protein zinc finger-like 61 88 IPR036443 -
Lele34g0751 720 FunFam Translation elongation factor EF-1 516 606 - -
Lele34g0751 720 CDD HBS1_C_III 607 715 - -
Lele34g0751 720 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 613 716 IPR009001 -
Lele34g0751 720 Pfam Elongation factor Tu C-terminal domain 607 715 IPR004160 -
Lele34g0751 720 PANTHER TRANSLATION FACTOR 288 715 - -
Lele34g0751 720 FunFam elongation factor 1-alpha isoform X4 610 719 - -
Lele34g0751 720 SMART zf_4 63 87 IPR001876 -
Lele34g0751 720 MobiDBLite consensus disorder prediction 132 157 - -
Lele34g0751 720 ProSitePatterns Zinc finger RanBP2-type signature. 65 84 IPR001876 -
Lele34g0751 720 Gene3D Translation factors 517 606 - -
Lele34g0751 720 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 289 520 IPR000795 GO:0003924|GO:0005525
Lele34g0751 720 Gene3D Translation factors 610 719 - -
Lele34g0751 720 FunFam Elongation factor 1 alpha-like protein 282 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0751 Lele-ChrLele34 17198815 17205768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0751 60 716 Eukaryotic Initiation Factors Gene Family AT5G10630 60.455 0.0 794