Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0750 ATGGCCGTGCCTCCGGTGTTGAAGCAGGAGAATGTGCATTATCTTGTAGCTCCTTATGAGGCAGATGCCCAGATGACATTCTTGGCAGCTAGCAAACAGATTGAAGCAGTTATAATGGAAGACTCTGATCTTATACCATTTGGTTGTCCAAGAATCATCTTTAAAATGGACAAGTTTGGTCAAGCTGTTGAGTTTCAACGTTCCATGCTACAAAAGAACAGAGACCTTAGTTTTGAAAGGTTCACCCACCAAATGCTTCTTGAAATGTGTATATTGAGTGGTTGTGACTATCTGCAGTCCTTGCCAGGAATGGGTCTCAAAAGGGCTCATGCAATTATCGAGAGATTCAAAAGTTATGACAAGGCTCTTAAGCATTTGAGATTCAATGGAGTTTCTGTCCCTTCCTCTTATGAAGAATCATTCAAGAAGGCTATATTGATTTTTCAATATCAACGAGTTTATAATCCAATCCATGAAGATATTGTTCATTTGTCTGATGTACCAGCTGATATCGAAATATCACAAGGAATAGCAAAAGGGGATCTTGATCCATTTACCAAAATGCCATTTCAGGTTGAAAAAAGGCTGCCCGCCAAATTTTTAGAGTTGATGGAATCTTCACGTTTCAGTGAGAGACAGAAAAATCTGGAACATACTATACTGCAACAGCCCATAGAGCCAATTCATAAACCTTGTCTGGGATTGTATAAGGAGCAAAAGGATACAAATTTCAAAGATACTATTGAGGGAAAGACTATGGAGCAAACAAGAAAGGTCCTTGTAAGGAGTCCTTATTTTCAGCATAAACAAGTAGAAAAAGATAATTGTGATCAAAAGTCAGATTGTTTGGTTGAAGATGATTTTGCCATTGGTGAGCATAAAAATACCATATCTGACAGTGCTTTAGGCAAAATAGAAGATACTATTGAGGGAAAGACTATGGAAGCAACAAGAAAGGTCCTTGTAAAGAGTCCTTATTTTCAGCATAAGCAAGAAGAAAAGAATAACTGTGACAGAAAGCAAGATTGTTTGTTCAAAGATGATGTTGCCATTGGTGAGCCTAAAAATACCATATCTGACAACCATATGATGAATAAAATCCTGAAAAGGAAGATCACCCCTGCTGACAGTGCTCAAAGAGAAAACTTGCAGCCCGGCAACATGCATTCTGCCTCAACTCTTCCCGACAATGGTTGTGATCAAAGTTTTGAGAGAACATTTACAGAGGGGAATTCTGAAGAGAAGTTTGGTGCAAATATTTCCCATCTAGACAATTACTCAAAAATATCAGAGAAATCTTTAGAAAAATTTACCTCAATGTTATCATCCTTCAGATACACATCTGGTTCTCGTGCCAGCGGTCTCCGCGCTCCTCTGAGGGATGTTCAGAACACTACTAACACTAGGCCAAAAACTGCGGACATCATCGAACAGTTTGCATTTGTGCCAAAAAAACAAAAGACTGACTGGACAAGGCGATGGGGCTAA 1488 0.3905 MAVPPVLKQENVHYLVAPYEADAQMTFLAASKQIEAVIMEDSDLIPFGCPRIIFKMDKFGQAVEFQRSMLQKNRDLSFERFTHQMLLEMCILSGCDYLQSLPGMGLKRAHAIIERFKSYDKALKHLRFNGVSVPSSYEESFKKAILIFQYQRVYNPIHEDIVHLSDVPADIEISQGIAKGDLDPFTKMPFQVEKRLPAKFLELMESSRFSERQKNLEHTILQQPIEPIHKPCLGLYKEQKDTNFKDTIEGKTMEQTRKVLVRSPYFQHKQVEKDNCDQKSDCLVEDDFAIGEHKNTISDSALGKIEDTIEGKTMEATRKVLVKSPYFQHKQEEKNNCDRKQDCLFKDDVAIGEPKNTISDNHMMNKILKRKITPADSAQRENLQPGNMHSASTLPDNGCDQSFERTFTEGNSEEKFGANISHLDNYSKISEKSLEKFTSMLSSFRYTSGSRASGLRAPLRDVQNTTNTRPKTADIIEQFAFVPKKQKTDWTRRWG 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0750 495 SUPERFAMILY PIN domain-like 6 96 IPR029060 -
Lele34g0750 495 Gene3D - 3 82 - -
Lele34g0750 495 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 7 24 IPR006084 -
Lele34g0750 495 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 86 101 IPR006084 -
Lele34g0750 495 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 48 IPR006084 -
Lele34g0750 495 Pfam XPG I-region 11 96 IPR006086 GO:0004518
Lele34g0750 495 SMART HhH_4 83 116 IPR008918 GO:0003677|GO:0003824
Lele34g0750 495 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 6 340 IPR006084 -
Lele34g0750 495 SMART xpgineu 8 78 IPR006086 GO:0004518
Lele34g0750 495 MobiDBLite consensus disorder prediction 379 400 - -
Lele34g0750 495 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 81 171 IPR036279 -
Lele34g0750 495 Gene3D - 83 151 - -
Lele34g0750 495 CDD H3TH_EXO1 84 155 IPR037315 GO:0003677|GO:0035312
Lele34g0750 495 FunFam exonuclease 1 79 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0750 Lele-ChrLele34 17193641 17198651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0750 6 137 Core DNA Replication Machinery Family AT5G26680 28.676 2.52e-10 60.5