Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0730 ATGGCGGAGGCGTCTGCAGCGAACGGAACCCACGAGGTTGTTTTGAACGTCAATGACAAATCCAAGGAAGACTCCGGCATCTCCGTCTCCGTCCCTTTCTTGCAGAAGCTGGTGGCAGAATTGGCGGGTACATACTTTCTGATATTTGCCGGTCAAGCGGCGGTGTTGGTAGACAAAGGCTATGGCCACCCAGTAACGCTTCCTGGGATTTCAATAGTTTGGGGACTTGCGGTTATGGTTCTTGTTTATTCCGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCCGTCACCATCGCTTTTGCTTCTACCAAACGTTTTCCCCTCAAACAGGTACCAGCTTATGTGTTAGTTCAGGTTCTGGGATCGACGCTTGCAAGTGGGACTCTCAGACTGATATTTGAAGGAAACAAAGACAACTTCGCAGGAACATTAGTTTCTGGGACGTATCTTCAAGGTTTTGTGGTCGAGTTCATCATCACCTTCTACCTCATGTTTGTCATTTCTGGTGTGGCCACAGATAACAGAGCGATTGGTGAGCTGGCTGGTCTCGCCGTAGGGGCAACCGTGTTGCTTAATGTCATGTTTTCTGGGCCGGTGACTGGAGCGTCAATGAACCCGGCGAGAAGCTTAGGGCCGGCGATAGTGTGGCATGAATACAAAGGAATATGGGTGTACATGATAGCACCGGTGGCCGGAGCAGTGGCGGGGGCTTGGGTGTATAACATCATAAGATACACAGACAAGCCAATAAGGGAGATCACAAAGAGTGCTTCATTCCTCAAAGCTACAAACCGTGGTGGTTAA 807 0.4981 MAEASAANGTHEVVLNVNDKSKEDSGISVSVPFLQKLVAELAGTYFLIFAGQAAVLVDKGYGHPVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTIAFASTKRFPLKQVPAYVLVQVLGSTLASGTLRLIFEGNKDNFAGTLVSGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGATVLLNVMFSGPVTGASMNPARSLGPAIVWHEYKGIWVYMIAPVAGAVAGAWVYNIIRYTDKPIREITKSASFLKATNRGG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0730 268 Gene3D Glycerol uptake facilitator protein. 5 256 IPR023271 -
Lele34g0730 268 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Lele34g0730 268 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 PANTHER AQUAPORIN NIP2-1 22 262 IPR034294 -
Lele34g0730 268 TIGRFAM MIP: MIP family channel proteins 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele34g0730 268 ProSitePatterns MIP family signature. 92 100 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0730 Lele-ChrLele34 17009656 17011137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0730 31 265 Major Intrinsic Protein MIP AT5G37810 59.149 4.77e-99 289