Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0726 ATGGTGACAGAACGAATTTTACTTATTTGGGTATGTATAGATTGGCTAATTCTGGTGAGGAAGAATAAGATCATTGTAGTTTCTCCTATGGATGAAGCTCAGGTTGGCTCTGGTTCCTTGCCTCCTTTCTTGGCCAAGACATATGAGATGGTGGAGGATCCTTCCTCGGATTCGGTAGTTTCTTGGAGCAGCTCTAATAAAAGTTTTGTAGTATGGGATCCGACAGAATTTGCAAGGGATTTGTTACCAAGATTCTTTAAACATAGTAACTTCTCGAGTTTCATCAGGCAGCTGAACACTTACGGTTTTAGAAAAATTGACCCAGAACGGTGGGAATTTGCGAATGATGATTTTATAAGGGGTCAACCACATCTTTTGAAGAGTATCCATAGGCGAAAACCAGTTCATAGCCATTCTTCACAGAATCAGCAGGGACATGGAGCTTCTCCAATGTCTGAATCAGAAAGGCAGAATTTCAGAGATGAAATAAGGAGGCTTAAACAAGATAAAGAAGTACTTGCTTTAGATTTACAGAGATATGAACAGGAATGGCAAACTTGTGAGATACAAATACATTGCTCAAGCAACCGGTTGGAAAAGTTGGAACACAAGCAACAAAAGATGGTCTCTTCACTTTCTCAAGCCTTGCAGAAACCTGGGGTTGCTTTAAATCTTTGTTCACTTTCAGAATCCCCGGATAGAAAACGAAGGTTGCCGAGAGGCGGGTCCTTTTGTGATGAAGCTAGCATTGAAGATCCTATGGAGACTTCCCAAATGTCACCTAGAGAAATCTCTATCCTGACATCAACCATGGAGCGATTGACTCAGCAGGAATCATCTCTGTTATTCTGGGAGAACATTGCACATGATGTTGGTGATACGTTTCTTCAAAGTTCTTCAAACCTGGACTTTGATGAGTCTACAAGTTTTCCTGATAGTCCACCGATATCGTGTGTGCAACTAGATATTGCAATTCAGCCACCAAAGTCATCTGGAATCGACATGAATGCTGAGCCTGCTGCTTCTGCTGTTCCTGAGACTGTTACATCAAAGGAACAAGTAACTGAAACGACCACTGTGGCGACTGGTGTTAATGATGTCTTCTGGGAACAGTTCTTGACAGAGAATCCCGGTTCATCAGAGACACAAGAGGTGCAGATGGAAGTGAAGGATTCTGATGGCAGAAAGAATGAAGGAAAACCTATTGAAGTACATAGATTTTGGTGGAATATGCGGAATGTAAATAATCTTCCAGAACAGATTGGGCATCTTAGTCAAGCAGAGAAAACTTAA 1293 0.4153 MVTERILLIWVCIDWLILVRKNKIIVVSPMDEAQVGSGSLPPFLAKTYEMVEDPSSDSVVSWSSSNKSFVVWDPTEFARDLLPRFFKHSNFSSFIRQLNTYGFRKIDPERWEFANDDFIRGQPHLLKSIHRRKPVHSHSSQNQQGHGASPMSESERQNFRDEIRRLKQDKEVLALDLQRYEQEWQTCEIQIHCSSNRLEKLEHKQQKMVSSLSQALQKPGVALNLCSLSESPDRKRRLPRGGSFCDEASIEDPMETSQMSPREISILTSTMERLTQQESSLLFWENIAHDVGDTFLQSSSNLDFDESTSFPDSPPISCVQLDIAIQPPKSSGIDMNAEPAASAVPETVTSKEQVTETTTVATGVNDVFWEQFLTENPGSSETQEVQMEVKDSDGRKNEGKPIEVHRFWWNMRNVNNLPEQIGHLSQAEKT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0726 430 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 30 269 IPR027725 -
Lele34g0726 430 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 Coils Coil 156 183 - -
Lele34g0726 430 MobiDBLite consensus disorder prediction 138 154 - -
Lele34g0726 430 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Lele34g0726 430 MobiDBLite consensus disorder prediction 130 158 - -
Lele34g0726 430 FunFam Heat shock transcription factor 1 36 133 - -
Lele34g0726 430 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 MobiDBLite consensus disorder prediction 377 398 - -
Lele34g0726 430 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele34g0726 430 Gene3D - 37 133 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0726 Lele-ChrLele34 16967543 16969328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0726 30 430 HSF AT4G18880 50.843 3.46e-122 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele34g0726 HSF_DNA-bind 3.6e-32 CL0123