Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0717 ATGGGGTCTTTGAAATACTGGGATTCTACTATTGTATGTGGAGTAGTAGCTGGAGGGAAGTTTGGGAGATTGGTAGTTCCTTTTGAAATAGATTCTGGCGACAGACTTGTTAATGTTCTGATCATGACAAGGGCTGTGCGCAGTAGGATACTCAAGGATGCGGATGGTGATATTAGTGATCATCTACGCAACCACATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGCCCCATTCTTGCTGATAGGTCGCTTATGAGGGACCTAGTTGTGTTGCAGAGGTCACGCTCTCTGAGAGATCCTTCAGCAAGCCCTCCTTCTTGGCATTCTCCTTCTATAATTGAGGTTCTTTCTAAGAGGGTTGACAATGATGCTGTGGTTCAGGAGGGAAGGTCTGTAGGAATTGAACGCCCGATAAAAGGGAGGCAGTTGTCTGGAGCCTCACCACCTGTGGTTAGTTTAGGTCCATCAAAAGTTGCTCCGGGTGAGGAGAGGGAGAGCCGGGGTAATGATGGAGGGTCAGCAAGTAGAGACCGAAGTAGCAGGAGTGGAATTGGGGATGGGAGGAAAGTTCGAAGAGAAGAGTCTGGTCGGAAGAGTGATAGGCCTGGTTATATGGGTCTCAGTGAAGAGCAACTTCACAGTCAACTTGGTAAAGATTTGGCTGAAGAGGTTGTTTCAAGGCATTCTGAATCTAAAGAGAGAAAGAGCAAACAAAGGGGGAAGCATGTTCAAGATGTTCAGGTTAAGACCCTTTCTGAGCAGCTGAATGATGTTCCACTGGATAGTGATGATTTGGCATCTTCAAACAATAATTTTCACAGAAGGGTTCCTAGGCAGCAGAAAATTTTCGAGGTTCCAGAAGCCAGCACACGTGGTCATGGGAACATAGTGAAGAGGGGAAAAAGGCGTAAATTTCGAAGTGCAAGAAGAGCTCGAGCTTCTTTGGTGTCTAAAGATGCTGGAGCTGAGCATGAAATGTCTGTTGCTTCTAACTCATTCGCTCATGGTTCTTCAGCCCACCATAAATATCACATGGAAGAGGAAGATGAGTATGCAGAAGAAAATGTCACCAGGGCGCCCAAAAATGGGTGTGGAATTCCTTGGAATTGGTCTAGAATTCATCACAGAGGTAAAACATTCCTTGACATGGCTGGACGAAGTTTATCTTGTGGTTTATCGGACTCAAGGTTAAGGAAAGGGGCATTGGATGCCAATGGAAGACATATTTCTGACATGCCTGTAGCATCTGATCAATCAAGCTCATTTACCAGGTCTGAGGGAGAGGTTCTGCCGTTACTAGTTGAGGCATCTGGATCTCAGGGAAGTACTGAGAATGCTTGTTGGGGGCATGACTATTCTGGAGAGCTTGGTATTTTTGCTGATAATTTTTTGAAGCGTGACATTGATTATGACCTCGCTTTTGAAGTTAGATCTGGGGATCAGCATAAGATGAGAGGGAATCACCGTGGCAGGCATCAAAGCTTAACACAAAAATATCTGCCACGAACCTTCAGAGATTTAGTTGGGCAGAATTTGGTGGCACAAGCTCTTTCAAATGCAGTCATTAGAAGAAAAATTGCATTTCTGTATGTGTTTTATGGACCCCATGGCACTGGAAAAACTTCCTGTGCTCGGATATTCGCTAGAGCTTTAAATTGTCATTCTTCTGAACACCCAAAACCATGTGGCTTTTGCAATTCTTGTGTAGCACATGATATGGGCAAGAGCAGAAGTATAAGGGAAATTGGTCCAGTCAGTAATTTTGACTTTGAGAGCATCATGGATCTGCTTGACAACATGATTGTTTCCCAGCTTGCATCGCAATACAGAGTGTTTATTTTTGATGATTGTGATACTCTGTCAGCTGAATGCTGGAGCGCCATATCGAAGGTCATTGATCGAGCTCCTAGACGCGTGGTTTTTATACTTGTTAGCTCGTCTCTTGACAGATTGCCTCACATAATCATATCCAGGTGTCAAAAATTTTTCTTCCCAAAGCTGAAGGATTCAGACATTATGCATACATTACAGAGGATTGCAACCAAAGAGGGTCTAGAAATTGATAGGGATGCCTTGAAACTTATTGTATCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAAAGAATATCAGTTCCTCTTGTCCAGGAACTAGTTGGGCTTATCTCTGATGAGAAATTGGTTGATCTGCTTGATTTGGCGCTATCCGCAGACACAGTTAACACCGTGAAGAATTTAAGAGTGATAATGGAAACTGGTGTTGAGCCATTAGCCTTAATGTCACAGCTTGCTACTGTAATTACCGACATACTTGCTGGGACGTATGATTTCACAAGAGAAAGAAGGAGAAGGAAGTTTTTCCGGAGACATCCATTATTGAAAGAAGATATGGAAAAACTACGCCAAGCTTTGAAAACTTTATCCGAGGCTGAGAAACAGTTGAGGATGTCCAATGACAAACTAACCTGGCTGACGGCTGCGTTGCTTCAACTTGCTCCTGAGCAGCAATATATGCTGCCTACATCATCTGATAATAGTTTCAATCATAGTCCATTGCCCCTAAATAATGCAGATGGGAGAGAAGCAGCCCGAAGAACAAGTACTAGTGTTGAAATTCTTCGCAAAGAGCGGTGTTTATCAATGGATTCTAGAACAGATAATATCCATGCTGGTAGTTCTGCGGATGGTATGACAAAGGGTCTTAGTTCAGATAATAAAAGACTCGCTACTGATATGATTAGAATGAACGACAGACAGACTCGGGGTAGAAACCGGAAAGGAATTGAAGAGATATGGTTAGAGGTTCTTGACAGAATTCAGGTTAATGGTTTAAAAGAGTTTTTATATAGAGAAGGGAAGCTGGCCTCTGTTAGTTTTGGTGCAGGAACTAGGTCACGCACAAACTTAGCTTTATCTGCAGGCTTCATCGTTCAACATAAAGTTGACATGATGCTAACAAGTGGAGTTTCGACTGCATTGTTGTCTTCAACTGTTCAGTTAATGACTAGTTCCCAACAGACCAAATCTACTACTGAGAAGTTCAGAGGGCAGATTCTACTGGCATTTGAATCTGTGCTTGGATCTTCCGTAACGTTAGAAATTAGATGTGAATCCAACAGAGATGCAGGATCAGGGTCTCAGCTCCCTCTTATACTGCCTTCTGCTAGAGATAATTCAGTAGAAAAGAAAATGAGTGAAATTGTAGAAGAAGAAGCAGCTTCTCCGAAGGACCATAAGAATAATGAGCAGCAGGTTGATGTTAACAAAAAGCCAATTGTGACTTCACAATTAGAAAGAAGGAGGCTTAGGGAACAATGTCAGAGCCGAAGCATCGTGAAAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAAGCAGAAGGACATACACAGCGTAGTGGGTGGTCAAAACGCAAAGCAGTTTCCATTGCTGAAAAGCTCGAACAAGAGAATCTGAGACTGGAGCCAAGATCAAGGAGCTTGCTATGCTGGAAAGCATCACGAGTAACTCGGCGGAAGCTTTCGCGTTTGAAAGTGAGAACCAGGAAACCTCTTGCGTTGCTGAATCTGGTCTCATGTGGAAAATGTCTCACTTCTAAATCTCCAAGGCCTTTTCCTGATGTTTGA 3672 0.4308 MGSLKYWDSTIVCGVVAGGKFGRLVVPFEIDSGDRLVNVLIMTRAVRSRILKDADGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSLMRDLVVLQRSRSLRDPSASPPSWHSPSIIEVLSKRVDNDAVVQEGRSVGIERPIKGRQLSGASPPVVSLGPSKVAPGEERESRGNDGGSASRDRSSRSGIGDGRKVRREESGRKSDRPGYMGLSEEQLHSQLGKDLAEEVVSRHSESKERKSKQRGKHVQDVQVKTLSEQLNDVPLDSDDLASSNNNFHRRVPRQQKIFEVPEASTRGHGNIVKRGKRRKFRSARRARASLVSKDAGAEHEMSVASNSFAHGSSAHHKYHMEEEDEYAEENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRKGALDANGRHISDMPVASDQSSSFTRSEGEVLPLLVEASGSQGSTENACWGHDYSGELGIFADNFLKRDIDYDLAFEVRSGDQHKMRGNHRGRHQSLTQKYLPRTFRDLVGQNLVAQALSNAVIRRKIAFLYVFYGPHGTGKTSCARIFARALNCHSSEHPKPCGFCNSCVAHDMGKSRSIREIGPVSNFDFESIMDLLDNMIVSQLASQYRVFIFDDCDTLSAECWSAISKVIDRAPRRVVFILVSSSLDRLPHIIISRCQKFFFPKLKDSDIMHTLQRIATKEGLEIDRDALKLIVSRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTRERRRRKFFRRHPLLKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPEQQYMLPTSSDNSFNHSPLPLNNADGREAARRTSTSVEILRKERCLSMDSRTDNIHAGSSADGMTKGLSSDNKRLATDMIRMNDRQTRGRNRKGIEEIWLEVLDRIQVNGLKEFLYREGKLASVSFGAGTRSRTNLALSAGFIVQHKVDMMLTSGVSTALLSSTVQLMTSSQQTKSTTEKFRGQILLAFESVLGSSVTLEIRCESNRDAGSGSQLPLILPSARDNSVEKKMSEIVEEEAASPKDHKNNEQQVDVNKKPIVTSQLERRRLREQCQSRSIVKSKVSLAHVIQQAEGHTQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKVRTRKPLALLNLVSCGKCLTSKSPRPFPDV 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0717 1223 MobiDBLite consensus disorder prediction 221 252 - -
Lele34g0717 1223 Pfam DNA polymerase III, delta subunit 516 673 - -
Lele34g0717 1223 Gene3D - 674 736 - -
Lele34g0717 1223 Coils Coil 806 836 - -
Lele34g0717 1223 MobiDBLite consensus disorder prediction 187 210 - -
Lele34g0717 1223 MobiDBLite consensus disorder prediction 856 880 - -
Lele34g0717 1223 FunFam DNA polymerase III subunit gamma/tau 494 672 - -
Lele34g0717 1223 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 502 903 - -
Lele34g0717 1223 CDD HLD_clamp_pol_III_gamma_tau 673 736 IPR045085 -
Lele34g0717 1223 SUPERFAMILY post-AAA+ oligomerization domain-like 744 848 IPR008921 GO:0003677|GO:0006260
Lele34g0717 1223 MobiDBLite consensus disorder prediction 345 362 - -
Lele34g0717 1223 MobiDBLite consensus disorder prediction 137 253 - -
Lele34g0717 1223 Gene3D - 491 670 IPR027417 -
Lele34g0717 1223 MobiDBLite consensus disorder prediction 339 364 - -
Lele34g0717 1223 MobiDBLite consensus disorder prediction 166 180 - -
Lele34g0717 1223 CDD AAA 514 673 - -
Lele34g0717 1223 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 499 847 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele34g0717 1223 FunFam DNA polymerase III subunit gamma/tau 674 736 - -
Lele34g0717 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 720 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0717 Lele-ChrLele34 16905944 16912216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0717 499 785 Core DNA Replication Machinery Family AT1G21690 23.264 1.00e-13 72.0