Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0711 ATGGCAATATCAGCCGAAGCTAATAAGAACATCAAGGCCAGAAAGAAATCATCATCCAGAGGCCACCATCGCTTTGTCGGAGTTCGTCAGAGGCCGTCAGGACGGTGGGTGGCCGAAATCAAAGACTCCCTTCAGAAGGTCCGGCTTTGGCTCGGAACATTCGACACAGCCGAGGATGCCGCTCGTGCCTACGACACAGCCGCACGCGCTTTGCGTGGCGCCAATGCTCGCACCAACTTCGACTTGCCAGATCCGGGAGGCGGCGGCGGGGCTGCCACCACGCAACACGGTGGCAGTAGTTTCAGCTACATGCCGGAGAATCTCGAGCCGTTCTCGTTCGAGGACACGAATGTGGGATCAGATCATCATGACCTCCTCGGAGCACTCAAGGCCAAGCTGTTTGATGAGAATGGAGTAGTGAGATTTCCTTCTCAATTATCTAATAATAGCCAAATCTTGACAGGTTTTGTAAACCCTAATAATAATAATCCAGGGTTTGCAAGCACTTCTTCATCAAGCACAAGCATGAGTGCTAAGAGCACTCACACGAATAATAATAACAATAGTAATATGCTAATCTCAGATCATCCCGACCATGGAGGTTCTATAGCAGCTGAAAATAATAATTCTTCTACAGTGCCCCTAATGACTACTTCATGGTCCAATAACAACAACGAGATAGGTAATTATGAATTGCCTAATTGGTATACAGGTCCTACACAGATATTGAACCAGGTGGATCCTGAAAATAATAGTAGCTTGTTTGCATGTTCAAGTAATTTTCCATGGCCAACAACACTATCTGGGGTTCACGTTATTGAGCCTACGATGAATATGATGTATTCAGATGTGGTCAACCTTGTTAACATCGACCAGAGAGAACGTGATTCAGATAGATCAGTCTTAGGATACTCCGACTGTAATAATAATAATCAAAATATGATGTTTTCTGAGAATCATATTGGGCCTTCTTCAAGTAGCAGAAGTATTAATGCTCAAATTGGAGGACTACACGAAGGGTTTTGGACAAATACAGATCAGCAGCAGCAGCAGCAAGTTCTGGTGCAGATTGACAATAATAATGGTGGTTGGTTTAGCTCCAATAGTAATAATAATGATACGTGGGATCCTTTGCTTTTTGTGTCGTCTGAATTAGGTTGA 1161 0.4444 MAISAEANKNIKARKKSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGANARTNFDLPDPGGGGGAATTQHGGSSFSYMPENLEPFSFEDTNVGSDHHDLLGALKAKLFDENGVVRFPSQLSNNSQILTGFVNPNNNNPGFASTSSSSTSMSAKSTHTNNNNNSNMLISDHPDHGGSIAAENNNSSTVPLMTTSWSNNNNEIGNYELPNWYTGPTQILNQVDPENNSSLFACSSNFPWPTTLSGVHVIEPTMNMMYSDVVNLVNIDQRERDSDRSVLGYSDCNNNNQNMMFSENHIGPSSSSRSINAQIGGLHEGFWTNTDQQQQQQVLVQIDNNNGGWFSSNSNNNDTWDPLLFVSSELG 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0711 386 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 MobiDBLite consensus disorder prediction 157 210 - -
Lele34g0711 386 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 233 - -
Lele34g0711 386 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Lele34g0711 386 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 FunFam ethylene-responsive transcription factor RAP2-11 23 82 - -
Lele34g0711 386 MobiDBLite consensus disorder prediction 78 97 - -
Lele34g0711 386 MobiDBLite consensus disorder prediction 157 195 - -
Lele34g0711 386 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Lele34g0711 386 MobiDBLite consensus disorder prediction 1 26 - -
Lele34g0711 386 SUPERFAMILY DNA-binding domain 25 81 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0711 Lele-ChrLele34 16819426 16820586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0711 12 80 AP2-EREBP Transcription Factor Family AT5G19790 68.571 2.81e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele34g0711 AP2 7e-13 CL0081