Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0703 ATGAGACCCCTTTTCAGATTCTTGATTCTTCTGGCTCTGCTTGCTCTTGTTGAATCTTCTTCCTCCTGCAAACTTAGTCAACAAGACCTCGACCTTGTGTCCAAGGCCTTCAAATCAGTCTCCGGATTCAACGTTTCCTGGTTATCCCACTGCTCCGGCGACGATCAGTTTACTGCCATAAGGCTTACTTCCAAGAATCTCCGTGGGGCTATTTCGTGGAAGTTTCTGAGGAACGTTTCAAACTTGCAAGTTCTTGATCTCTCTGGGAATTCTCTTCAAGGTCAAGTGCCTGGCGGGCTCTGGGCATGCTCCAGCTTACTTGAGGTCAATCTTTCCAATAACAGGTTCGGTGGTAGCATTAATGGCTCCTTCGCTTCTTCTCTTCAAATGCTTAATCTCTCACACAATAGGTTCACAAATCATGTTCAGCTTTCTGGGTTTTCAAAGCTCAAAGTTCTTGACCTTTCTCATAACAATCTCAAATACCTCCCTTCTGGGTTTCAGATGTTCACCACCAACCTGAACCACCTTGACCTATCGAACTGTAAAATCAAAGGAAATGTCAAACCTATCTCTGTTTTGAAGTCATTGAATTATTTGGACCTCTCAAATAACGAATTGAATGGTACTTTCCCTTCTGATTTCTCTCGTCTTCATACCCTTCATTTCTTGAACATTTCTCACAACAATTTCAGAGCAGTACTTAGCTTCGATGCGTACAAGAAGAAATTCGGCAAATCAGCTTTCCTTTACGCCGGTGCGAACTTCAATTACAGCGCTTCCAAAACGGCGCCGTTTCATCGCCCTTGGTTTCCCTCTCAGAAACAAAACCCGATCAGTAGGAAACGATCCGAATCAAAATCTAAAACGCTGATTCTCTCAGTGTGCTCTGCTACAGGATTCGTCATTGTTCTCCTGTGTATTTCTATGTTCTGTATCTACAGAAAGAAGAGACGATTGGCTAAGAGAAACAAATGGGCGATCTCGAAACCAGTCCCTCCATTGCCTTTCAAGGTAGACAAATCTGGACCGTTCGCTTTCGAGACTCAATCAGGTACATCTTGGGTGGCTGATCTGAAGGAGCCATCGTCGGCGCCGGTCGTGATGTTCGAGAAGCCATTGATGAACTTGAGCTTCAAGGACCTGATCGCTGCCACGTCACGCTTCGGCAAGGACTCGCTACTCGCAGAGGGGAGGTGTGGCCCCGTCTACAGAGCCGTCTTACCCGCCGGCGGAGACATCCACGTGGCAATCAAGGTTCTGGAGAACGCCAGAGCCGTCGATCATGACGACGCCGTCGAATTGTTCGTTGAACTCTCAAAGCTCAAGCACCCAAACGTACTTCCTCTCTCCGGTTACTGCATTGCAGGTAAGGAGAAGCTGGTGTTGTACGAGTTCATGTCGAACGGCGATTTAGGAAGGTGGCTTCATGAGTTGCCAACGGGGCCTACTAACGTGGAGGATTGGAGTGGCGACACGTGGGAGATTCAAAACGGCGTCGGGCCTCAGGCGTCCTCTCTGGAAACGATGGGTTGGGGAACACGGCACCGTATTGCAGTCGGGATAGCACGTGGCCTGGCGTATCTCCACCATGCCGGATCAAAGCCCGTCGTACATGGCCACCTAGTCACTTCCAATATCTTACTAGCCGACGACTTCGAGCCCAAAATCGCGGATTTTGGGTTCAGGAAAATCGGGCAACAAGATAAGCCGAACTGCACGACGGAGACGGACGTTTACTGCTTCGGCGTCGTGCTGATGGAGCTCTTGACAGGGAGGGAAGGCACGGCGGAGACAGTGGTGTGGGTGAGGAAGATGGTGAGGGAGGGAAATGGGGTGCGGGTGTTGGATGAAAGACTGAGAGATGACGGCGGCGAGGCAGAGAGGGAGATGGCGGAGAGCCTCCAAGTCGCGTTCCTGTGTACGGCGGAGTCACAGGAGAAGAGACCCACCATGCAGCAGGTCCTGGGTTTGCTCAAAGACATTCATCCTTATGGTGGACTCCATCGGTGTCAAGTCTGA 2022 0.4995 MRPLFRFLILLALLALVESSSSCKLSQQDLDLVSKAFKSVSGFNVSWLSHCSGDDQFTAIRLTSKNLRGAISWKFLRNVSNLQVLDLSGNSLQGQVPGGLWACSSLLEVNLSNNRFGGSINGSFASSLQMLNLSHNRFTNHVQLSGFSKLKVLDLSHNNLKYLPSGFQMFTTNLNHLDLSNCKIKGNVKPISVLKSLNYLDLSNNELNGTFPSDFSRLHTLHFLNISHNNFRAVLSFDAYKKKFGKSAFLYAGANFNYSASKTAPFHRPWFPSQKQNPISRKRSESKSKTLILSVCSATGFVIVLLCISMFCIYRKKRRLAKRNKWAISKPVPPLPFKVDKSGPFAFETQSGTSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSRFGKDSLLAEGRCGPVYRAVLPAGGDIHVAIKVLENARAVDHDDAVELFVELSKLKHPNVLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGPTNVEDWSGDTWEIQNGVGPQASSLETMGWGTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPKIADFGFRKIGQQDKPNCTTETDVYCFGVVLMELLTGREGTAETVVWVRKMVREGNGVRVLDERLRDDGGEAEREMAESLQVAFLCTAESQEKRPTMQQVLGLLKDIHPYGGLHRCQV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0703 673 Gene3D Ribonuclease Inhibitor 168 243 IPR032675 -
Lele34g0703 673 SUPERFAMILY L domain-like 40 235 - -
Lele34g0703 673 Gene3D Phosphorylase Kinase; domain 1 349 466 - -
Lele34g0703 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 662 - -
Lele34g0703 673 Pfam Leucine rich repeat 66 116 IPR001611 GO:0005515
Lele34g0703 673 FunFam Putative LRR receptor-like serine/threonine-protein kinase 350 466 - -
Lele34g0703 673 ProSiteProfiles Protein kinase domain profile. 389 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0703 673 SUPERFAMILY Protein kinase-like (PK-like) 366 659 IPR011009 -
Lele34g0703 673 Pfam Protein tyrosine and serine/threonine kinase 393 566 IPR001245 GO:0004672|GO:0006468
Lele34g0703 673 Gene3D Transferase(Phosphotransferase) domain 1 467 571 - -
Lele34g0703 673 Gene3D Transferase(Phosphotransferase) domain 1 572 665 - -
Lele34g0703 673 Gene3D Ribonuclease Inhibitor 24 167 IPR032675 -
Lele34g0703 673 Pfam Leucine Rich Repeat 149 165 IPR001611 GO:0005515
Lele34g0703 673 SMART LRR_typ_2 79 103 IPR003591 -
Lele34g0703 673 SMART LRR_typ_2 194 218 IPR003591 -
Lele34g0703 673 SMART LRR_typ_2 147 169 IPR003591 -
Lele34g0703 673 PRINTS Leucine-rich repeat signature 194 207 - -
Lele34g0703 673 PRINTS Leucine-rich repeat signature 150 163 - -
Lele34g0703 673 FunFam Calmodulin-binding receptor kinase CaMRLK 126 237 - -
Lele34g0703 673 ProSiteProfiles Leucine-rich repeat profile. 149 170 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0703 Lele-ChrLele34 16750345 16752885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0703 57 662 Receptor kinase-like Gene Family AT5G07280 31.692 6.39e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele34g0703 PK_Tyr_Ser-Thr 7.4e-22 CL0016