Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0702 ATGGCTGACATCGTCGTTTCAAACAACGGTCTCAATCCCATGATGAAGAAGAAGAACAACGCCAATCTCTTACTCGGCCGTTTTGAAGTCGGGAAACTCCTCGGCCATGGAACATTCGCAAAGGTCTACTACGCTGAGAATATCAAAACGAATGAAGGCGTCGCCATCAAGATCATCGACAAAGAGAAAATCCTCAAAGGTGGCTTAGTGGCTCACATCAAGCGCGAGATCTCAATCCTCCGCCGTGTCCGCCACCCTAACATTGTCCAGCTCTTCGAAGTGATGGCCACGAAGACCAAGATCTACTTCGTCATGGAATACATCCGCGGCGGCGAGTTATTCAATAAAGTTGCAAAAGGCCGATTGAAGGAAGAAGTCGCCAGAAAATATTTCCAGCAATTGATCGCCGCCGTAGAATTCTGCCACGCCAGAGGCGTATACCACCGCGATCTTAAGCCGGAAAACTTGTTACTCGATGAAAACGGCGATCTCAAGGTTTCCGATTTTGGCCTGAGCGCTGTCTCCGATCAAATCAGACAAGACGGATTGTTTCACACTTTTTGTGGAACGCCTGCGTATGTTGCTCCTGAGGTTCTGGCAAGAAAAGGATACGACGGAGCCAAAGTTGATCTCTGGTCTTGTGGCGTTATTCTCTTCGTTTTAATGGCGGGTTATTTACCATTTCATGATCAGAACGTTATGGCTATGTACAAGAAAATTTACAGAGGCGTTTTCCGGTGTCCCAAGTGGTTCTCGCAGGACCTAAACCTATTATGTACTCGTCTTCTCAATACAAACCCAGAAACCAGAATCTCAATTCCAGAAATCATGAAAAACAGGTGGTTCAAGAACGGGTTCAAACAAATCAAATTCTATTTCGACGAGGATAAGCTCTGTACCAGTTTTGAAGATATCGACAAACTGGATTTAAACAAAGATGACATAGAATCAATCTCAGACTACTCAGTATCAGAATCCGATTCAGAGCTAGAGATTAAAGGAAGAAGCAAAAGTTCATTGCCAAGACCGGCAAGCTTGAATGCATTTGATATAATATCATTTTCTGCAGGCTTCGATCTTTCTGGGTTGTTCGAGGAGAAAGGGGACGAGGCGAGGTTCGTGTCGAGTGCGCCGGTGTCGGAGATAATATCAAAGTTGGAGGAAATTGCGCAGTTGGTGAGCTTTACGGTGAGGAAGAAGGGTTGCAGGGTGAGCTTGGAGGGATCAAGGGTAGGTGTGAAGGGGCCATTGACGATTGCGGCTGAGATATTCGAGCTGACTCCGAAATTGGTGGTGGTGGAGGTGAAGAAGAAAGCAGGGGATAAAACAGAGTATGAACAGTTTTGCAACTCTGAATTGAAACCTGGCTTGCAGAAGTTGATGATGAAGTATGAATCAGGAACTTCTTCTTTTTCGAAGAGAAATTTTCCTGATGATGACTCTCCCCAATCTGATTCTGATTCTTAG 1467 0.4533 MADIVVSNNGLNPMMKKKNNANLLLGRFEVGKLLGHGTFAKVYYAENIKTNEGVAIKIIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYIRGGELFNKVAKGRLKEEVARKYFQQLIAAVEFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVILFVLMAGYLPFHDQNVMAMYKKIYRGVFRCPKWFSQDLNLLCTRLLNTNPETRISIPEIMKNRWFKNGFKQIKFYFDEDKLCTSFEDIDKLDLNKDDIESISDYSVSESDSELEIKGRSKSSLPRPASLNAFDIISFSAGFDLSGLFEEKGDEARFVSSAPVSEIISKLEEIAQLVSFTVRKKGCRVSLEGSRVGVKGPLTIAAEIFELTPKLVVVEVKKKAGDKTEYEQFCNSELKPGLQKLMMKYESGTSSFSKRNFPDDDSPQSDSDS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0702 488 Pfam NAF domain 343 399 IPR004041 GO:0007165
Lele34g0702 488 Gene3D Kinase associated domain 1, KA1 341 463 - -
Lele34g0702 488 SUPERFAMILY Protein kinase-like (PK-like) 24 324 IPR011009 -
Lele34g0702 488 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0702 488 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0702 488 FunFam Non-specific serine/threonine protein kinase 17 328 - -
Lele34g0702 488 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 454 - -
Lele34g0702 488 MobiDBLite consensus disorder prediction 467 488 - -
Lele34g0702 488 ProSiteProfiles NAF domain profile. 341 365 IPR018451 GO:0007165
Lele34g0702 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lele34g0702 488 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0702 488 FunFam Non-specific serine/threonine protein kinase 343 461 - -
Lele34g0702 488 CDD CIPK_C 347 458 - -
Lele34g0702 488 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lele34g0702 488 Gene3D Transferase(Phosphotransferase) domain 1 18 337 - -
Lele34g0702 488 FunFam Non-specific serine/threonine protein kinase 19 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0702 Lele-ChrLele34 16736384 16737850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0702 23 460 CBL-interacting serine-threonine protein kinases AT4G18700 80.137 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele34g0702 Pkinase 2.2e-73 CL0016