Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0701 ATGGATTCAGAACAAACGGAGAAGAAAGGAACAATTCTTATGCAGAAATACGAGCTAGGCCGTTTGCTCGGCCAAGGCACATTCGCCAAAGTTTACCACGCCAAGAGCATCCAAACCAACCAGGGCGTCGCCATTAAAGTCATCAACAAGCAGAAAATTCTCCGAATCGGCTTGATCGATCAAATCAAGCGCGAGATCTCCGTGATGCACCTCGTAAGGCACCCCAACATCGTTCAGCTCTACGAAGTAATGGCGAGCAAGAACAAGATTTACTTCGCGATGGAGTACGTGAAAGGCGGCGAGCTCTTCGCCAAAGTCGCGAAAGGGAAATTGAAAGAGGATTTGGCGCGAAAGTATTTCCAGCAGCTAATCTGCGCCGTCGATTTCTGCCATAGCCGAGGGGTTTATCACCGAGATCTGAAACCGGAGAATCTTCTTCTGGACGAAAATGGGGATCTAAAGATTTCGGATTTTGGGTTGAGTGCTTTGTATGAACCCAGAAAGAACGATGGTCTTCTCTATACAACTTGTGGAACGCCAGCTTATGTGGCCCCTGAAGTGCTCAACAGAAAAGGCTATAATGGAGTCAAAGCTGATATATGGTCTTGTGGGGTTATTCTGTTTGTTCTTCTTGCAGGTTTTCTTCCATTTCAGGATAAGAATCTGATTGAAATGTATAGGAAAATTATGACCGCAGATTTCAAGTGTCCCAAATGGTTCACACCTCAAACCAGAAGGATTGTCACCAGAATTCTCGATCCAAATCCAAGAACAAGATTAAGTATTGCAAAGATTAGGGAAAATGGCTGGTTTAAAATCGGGTATCAGCAGATTGAACCATCCAAATTACCAGTTTCCAATCCAGTGAACGATGTTCAGGCAGTTTTTGATTCTTCATCATCATCAAGTCCAGAGGAAAAAGCCAAAGAAATTACCCCAATGAAAGTGAAACCATCTGTCTTCAATGCGTTTGATATAATATCCCTATCTTCAGGATTTGATCTCTCTGGTTTGTTTGAGGAAGATAAGTGTCGGAGACAACATGCTAGATTCACCACCACGAAGCCGGCATCAACGATTGTGTCTAAACTGGAAGAAATAGCACAATCAGAGAGCAAATTCAAGGTTATGAAGAAAGATTGTGGAACTGTGAGATTGGAGGGAAGCAAAACAGGTCGAAAGGGACAACTTGGTATCGATGCAGAGATTTTCGAGGTGACATCAACGTTTCATGTTGTGGAAGTGAAGAAAACAGCAGGTGATACGCTTGAGTTTATGCAGTTCCGGGATCAGAACTTGAAGCCTTCATTGAAGGATATAGTGTGGACTTGGCAAGGAAGTGAGTAG 1347 0.4358 MDSEQTEKKGTILMQKYELGRLLGQGTFAKVYHAKSIQTNQGVAIKVINKQKILRIGLIDQIKREISVMHLVRHPNIVQLYEVMASKNKIYFAMEYVKGGELFAKVAKGKLKEDLARKYFQQLICAVDFCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALYEPRKNDGLLYTTCGTPAYVAPEVLNRKGYNGVKADIWSCGVILFVLLAGFLPFQDKNLIEMYRKIMTADFKCPKWFTPQTRRIVTRILDPNPRTRLSIAKIRENGWFKIGYQQIEPSKLPVSNPVNDVQAVFDSSSSSSPEEKAKEITPMKVKPSVFNAFDIISLSSGFDLSGLFEEDKCRRQHARFTTTKPASTIVSKLEEIAQSESKFKVMKKDCGTVRLEGSKTGRKGQLGIDAEIFEVTSTFHVVEVKKTAGDTLEFMQFRDQNLKPSLKDIVWTWQGSE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0701 448 FunFam Non-specific serine/threonine protein kinase 11 312 - -
Lele34g0701 448 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Lele34g0701 448 SUPERFAMILY Protein kinase-like (PK-like) 13 318 IPR011009 -
Lele34g0701 448 Gene3D Kinase associated domain 1, KA1 316 443 - -
Lele34g0701 448 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Lele34g0701 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lele34g0701 448 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0701 448 FunFam Non-specific serine/threonine protein kinase 316 442 - -
Lele34g0701 448 Pfam NAF domain 318 378 IPR004041 GO:0007165
Lele34g0701 448 CDD CIPK_C 322 438 - -
Lele34g0701 448 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Lele34g0701 448 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0701 448 Gene3D Transferase(Phosphotransferase) domain 1 102 276 - -
Lele34g0701 448 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0701 448 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lele34g0701 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0701 Lele-ChrLele34 16729980 16731326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0701 7 446 CBL-interacting serine-threonine protein kinases AT5G45820 64.494 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele34g0701 Pkinase 1.2e-72 CL0016