Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0652 ATGCTAGCTGATGGACACAAGAACAACTACAAATTGCAATATTCTTCTTATACCTGTGAAATTACCAAACTTCGTTCCAAGGCTATGAATTCAGATCGAAGCCTTTTGCTTCTTCTTTTTGCTGCTTTCAGTTCTACTATTCTCCTTCTTCATTGCTTCCCAGGAGCTTCAGCAGATAACAGTAATAATGGAATCAACATTGATGTTGGTGCAATTATTGATTTCAATTCTCAAGCAGGAACACAACAGAAAGCGGCCATGGAAATTGCAGCGCAAAGCTTTAACAGCTATTCAAATAGCCTCAACATATCCCTCCATTTTCGTGACTCTCTAAGCAATCCATTGCCGGCAGCTTCTGCTGCTCAAGAGCTAATAAATAAAACGAAAGTTGAAGTTATCATTGGAATGGAAACATGGAAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCAGTAATTTCATTCTCATCTCCTTCAATATCCTCACCATCATCATCAATCCCAATTCGATGGCCTTTTCTGATTCAAATGGCCAAAAACCAGACTGCAAATATGAACTGCATAGCTGATATTATTCATGCATATGGCTGGCAAAAGGTTATAGCCATATACGAAGATGATTCTTATAGTACTGATTCTTCAGGCATGTTAACTCTCCTTTCTGAAGCCCTCTTGAAGACTAATTCCCAAATTGAACGTAGAATTGTCCTCCCACCATTTTCTTCATTATCTGATCCAAAAGGGTTTGTTCTTGATGAACTGATTGATCTATTATTATCAGCACAATCTAGGGTTTTCATTGTTCTCAAAGCTTCATTGCCTATGGTGACTCATTTGTTTAGAGAAGGTAAGAGATTAGGGTTCTTAGGGAAAGATTCAGCTTGGATCATTAATGATGATATTGCTAACATACTTGACTCAGTCAACGATGAAACTGTCTTATCCTCCATGGAAGGTACTATTGGAATTAAAAGCTACTATTCTACTAGTTCAAGTGCTTATACTCAGTTCATACAAAAATTTCATCGAAACCAGTCCAATAATCCAGGATTGTTTGCACTGCAAGCTTATGATAGCATCACGATCGTCACAAAAGCCTTAGAGAAGATGAATGGTACTAAGAATAATCCCAATAACTCTCGAGTGTTCATGGAGACAATGCTGTCTGGTAACTTCACTGGTTTAACAGGTAACATAAGGTTCAAGGAAGGCCATTTATATTCAGAGACGCCATTGTTAAGAGTGATAAACGTGGTGAACAAGAACTTCACGGAATTGGACTTCTGGGTACCAAATTTGAAGTTCTTTAAATCTCTTGAAGACATAGAGAAAGGAAACAGTGATGGTGCTAGAGATAATCTAAGTGGTCCAGTGGTTTGGCCTGGAGGTTTAAAGACTGATATAAACAATAATGATGATGATTTTCCATTAGGATGGAATATACCTTCGGACGTGAAACCTTTAAAAGTAGCAGTTCCTGTGAATCCTGCTTTCGAGAATTTTGTGAAGGAAGAATCTCCTGGGAAATATGTTGGTCTGTGTATTGAACTTTTTGAAAAGGTTCAAGAACAGCTTAAACATAAGTACTCTGGTTTGCCATATAAATATTTCCCCTTCAAAGTATCTTATGATGAGCTTCTACAAAACGTCGCCAACCAGTCGTATGATGCTATTGTTGGAGACGTAACGATACTTGAGGATCGATCGAAGAATGTATCTTTCACACTGCCATACTCAGAGTCTGGTTTATCACTCATACTTCCAGCTGAGAAAGAAGGCACCACATTTCTGTTCGTGAAGCCATTTAGTTGGCAAATGTGGCTCGCCACTGGTGCCATCTTCTTATACACAACGCTTACCATCTGGTTCCTGGAGCATCCCTTAAACCCTAGCTATAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCCTTTTCTTCCCTATTTTTCGCTCACGGGGGTAAAGTGTACAGTAATTCAGGAAGAGTGGTGGTTGCTGTATGGCTATTTCTGGTGTTCGTTCTGACTTCAAGCTACACAGCAAATCTGTCTTCTATGCTCACTGTGAAACGCATGAAGACTGGCAGAGATGTTCAATGGCTGAAGGAAAACAAGTTAAAAGTTGGGTGTGACAATAGCAGTGAATTTGTGAAGAACTACTTACTCCATGTCTATGATATACCTAAAGAACAGATCTTAAATCTTGATGGTGAACCTGACTTTGTGGACAAGTTTAAGAGCAAACAAATATCTGCTCTCTTCCTTGAGAGCCCATATGAAAAGGTTTTCTTAAGCAAGTATTGTAACCAATACACTGCAACTCGTGCTGGCTATAAATTTGGAGGCCTCGGCTTTGTCTTCCAAAGAGACTCTCCTCTGGTGAAAGACTTTTCTGAAGGAATTTTAAGGTTAGCAGAGAATGGAACCCTAAAGAATTTGGAAGAAAAATGGTTGACCCCTTCCAATAACTGCTCAAGCGACTCGACATCATCTTCTGAAACTGAAAGCCTAACCATCGCCGACTTTTGGATTCTCTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCGTTGCTCTGTTTAGGACTCACCTTCATCAACAGAAACAAGGTGATGATGAAGACACTAATAATGATATAGAAGCTTCAGATAATAATGGAAGTGTTTGGAACAAGGCACTGGGGAGACTCACTTCGGGGCTTTACAACAATATTGGGAGTTTCAATTTCAACACCATAGGAAGAGCTGCAACTTTTGGTGGAACAGAAACTGTTGGCCGTTGGAATTCTTCGGGGTGGGAGAGTGTCAGAACTTCTGATGATGATCATGTTAATCCTCGTAGGACCCAATCAGTTGGCTTAGAAATGTTACAGCTACAACCGTAA 2910 0.3969 MLADGHKNNYKLQYSSYTCEITKLRSKAMNSDRSLLLLLFAAFSSTILLLHCFPGASADNSNNGINIDVGAIIDFNSQAGTQQKAAMEIAAQSFNSYSNSLNISLHFRDSLSNPLPAASAAQELINKTKVEVIIGMETWKEAAFVAELGDKAQVPVISFSSPSISSPSSSIPIRWPFLIQMAKNQTANMNCIADIIHAYGWQKVIAIYEDDSYSTDSSGMLTLLSEALLKTNSQIERRIVLPPFSSLSDPKGFVLDELIDLLLSAQSRVFIVLKASLPMVTHLFREGKRLGFLGKDSAWIINDDIANILDSVNDETVLSSMEGTIGIKSYYSTSSSAYTQFIQKFHRNQSNNPGLFALQAYDSITIVTKALEKMNGTKNNPNNSRVFMETMLSGNFTGLTGNIRFKEGHLYSETPLLRVINVVNKNFTELDFWVPNLKFFKSLEDIEKGNSDGARDNLSGPVVWPGGLKTDINNNDDDFPLGWNIPSDVKPLKVAVPVNPAFENFVKEESPGKYVGLCIELFEKVQEQLKHKYSGLPYKYFPFKVSYDELLQNVANQSYDAIVGDVTILEDRSKNVSFTLPYSESGLSLILPAEKEGTTFLFVKPFSWQMWLATGAIFLYTTLTIWFLEHPLNPSYKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSGRVVVAVWLFLVFVLTSSYTANLSSMLTVKRMKTGRDVQWLKENKLKVGCDNSSEFVKNYLLHVYDIPKEQILNLDGEPDFVDKFKSKQISALFLESPYEKVFLSKYCNQYTATRAGYKFGGLGFVFQRDSPLVKDFSEGILRLAENGTLKNLEEKWLTPSNNCSSDSTSSSETESLTIADFWILYVISGLTSTIFLIVALFRTHLHQQKQGDDEDTNNDIEASDNNGSVWNKALGRLTSGLYNNIGSFNFNTIGRAATFGGTETVGRWNSSGWESVRTSDDDHVNPRRTQSVGLEMLQLQP 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0652 969 FunFam Glutamate receptor 599 729 - -
Lele34g0652 969 Pfam Ligand-gated ion channel 827 857 IPR001320 GO:0015276|GO:0016020
Lele34g0652 969 Pfam Receptor family ligand binding region 83 407 IPR001828 -
Lele34g0652 969 FunFam Glutamate receptor 188 354 - -
Lele34g0652 969 Gene3D - 184 430 - -
Lele34g0652 969 Pfam Bacterial extracellular solute-binding proteins, family 3 498 826 IPR001638 -
Lele34g0652 969 SMART AABind_6 491 828 IPR001638 -
Lele34g0652 969 Gene3D - 70 412 - -
Lele34g0652 969 SUPERFAMILY Periplasmic binding protein-like II 483 826 - -
Lele34g0652 969 SMART GluR_14 493 827 IPR001320 GO:0015276|GO:0016020
Lele34g0652 969 PIRSF IGluLR_plant 37 907 IPR017103 -
Lele34g0652 969 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 68 886 - -
Lele34g0652 969 Gene3D - 487 599 - -
Lele34g0652 969 Gene3D - 600 728 - -
Lele34g0652 969 Gene3D - 773 833 - -
Lele34g0652 969 SUPERFAMILY Periplasmic binding protein-like I 66 434 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0652 Lele-ChrLele34 16100922 16106657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0652 27 886 Ion Channels AT2G29120 31.153 2.51e-126 404