Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0650 ATGACTATTCCTGAAGCACTTCCAAGATTTTGCCTATTCTTTCTTCTGCTCATCTCTTCTTTTTTCTTTCATGTCTATGGATATGAGCCTACAAAAGGAGACACTAAAGTCATACGTATAGGTGCAATTATTAATGTTAACTCTCGTATTGGTAAAGAACAGCAAATAGCCATGGAAGTTGGAGCACAAAACTACAATAACACATCAAAGACTCTCAAGCTGGCTCTTTATTTCCGGAATGCCTCTAAGGAAGCCTTCAGAGTTACCTCTCTTGCTGAAGAGTTAATTGAAATGCAGAAAGTAGAAGTAATTATAGGGATGCATACATGGCAAGAAGCGACTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTGTCACCTGCAATAACCCCACCTTTGACACAAAAACGCTGGCCGTACCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCGTTTAGTTGGCAACGAGTAGTAGTAGTTTATGAAGACGATGGCTATGTTGGTAGAGACTACGGCATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACTTTGGTTCACTAATTGAATACCGTTTAGCACTCCCACCAATTTCTTTTCTGCCAGATCCAGGAGAGCTAATCAATGAAGAGCTGATTAAATTGGTCACGCAAACTCAATGTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAATTGGTGACTCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTACTCTGCTTGACTCTGTGGATAAGTCTGTTATTTCCTCCTATATGGGAGGGACTTTAGGAATCAAGACGCATTACTCAGAAAATAGCATTGAGTACCAAAATTTTCAAGCTCAGTTCCAGAAAAAGTTTCGTGCAAAGTATCCTGAGGAAGATAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCACCAAAGTTGTCATTCAAGCAGTAGAAAGAATGGAAAGGGACAAAAGCAGCAGCCCAAAAGCATTGCTAAGAGAAATATTGTCTAGCGGTTTCAATGGTTTAAGTGGGGAAATTCATTTTCAAGTAGGTCAGCTCTTGCAGAATCCTATCCTAAGGATAGTTAATGTAGTTGGGAAGAGTTATAAAGAAATAGACTTTTGGAGTCAAGAAAATGGGTTCACCACAAGCCTTCCTACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAAGTTTGGCTGGTGTAGTACAATGGCCAGGGAATTTGCAGAGAACTCCAAAAGGTTGGAATATGCCTGTTAAGCAAAACCCAATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTCGTCAAGGTTGACTATGGAAAAAATCGAGATCAGAACCAATATCATGGATTCTGTATTGAGGTTTTCAATAAGGTTCTTGAGCTTTTGGAATATGATCTACACTATGAGTTTTATCCCCTCAATGTAACTTATCCGGATCTGGTTCAACTTGTGTATAACAAGACTTATGATGCAGTTGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTACCATATGCAGAATCAGGATTGTCCATGATAGTTTCAGTAAAGCCTCAAGACTCAGCATGGATGTTTCTAAAGCCATTCACCTGGCAAACGTGGGCGGTTGTTGGTACAACATTGATTTACACTATGTTAGTAATTTGGTACCTTGAACGAGTAACTAATCCAGAGTTTCAAGGCAATTGGAAGAGACAGTTTAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAGGGAGCAAATGCATAGCAACTTATCTCGTGTGGTGATGGGAGTATGGCTTCTTCTAGTTATGGTTATGACCTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACGGTTCAACAACTGCAGCCAAACGTCACTAGTATTGAGTGGCTGAAGATGAACAACATGAAAATTGGTTGTGATGGCGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAAGTCAGAAAACATCATTAACATAAGTAGTGAATACAATTATGATGGTGTATTAAAAAACAACTCAATAGCAGCAGCTTTTCTCGAAGTCCCTTATGAAAAAGTATACATAAGTACTTACTGCAAGAAATATTCTGGCTCCACACCAACCACCAGATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAGTGGCCAAAGATGTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAACTTGGAAGCAAAATGGTTAAAGCAATCAAACGAGTGCACCAACAGCTCAACCTCCAAAGATACACAAAGTCTGAAGCTTGAAAGTTTCTGGGTTCTCTTTCTCATTTCTGGGATCACATCTACTATTTGTTTACTATTTTCTATCATTCAATCACAAGGAAGTCACCTAACTCAAAATATGACTCAATTAGGCAATGGACCCACAAGTGATATGACAGTTTGGATAAGAACACTTGAATTAGCTAAGCGGATTTATAGCAGAAAGCTTATTCAGGAAACTCATTTGTATGGGCCCACGACTGGGGCACAAGTGGTAAATGACTGCTCTTCCAGATGGGACTATGTCAGCACCACTGATTCACCTATGCATCAACAAGATACTGCATCCCCAGCACCCACAGTCATTGTGCTCTCTTCACCACCACCAGAGACCCAAATGGAAACCCCTGATAATAGATGA 2829 0.4012 MTIPEALPRFCLFFLLLISSFFFHVYGYEPTKGDTKVIRIGAIINVNSRIGKEQQIAMEVGAQNYNNTSKTLKLALYFRNASKEAFRVTSLAEELIEMQKVEVIIGMHTWQEATLVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEDDGYVGRDYGMLSLLSEALQDFGSLIEYRLALPPISFLPDPGELINEELIKLVTQTQCQSRVFIVLHSSLELVTHLFREGSKMGLVDKDSAWIISESITTLLDSVDKSVISSYMGGTLGIKTHYSENSIEYQNFQAQFQKKFRAKYPEEDNSNPGFYALQAYDSTKVVIQAVERMERDKSSSPKALLREILSSGFNGLSGEIHFQVGQLLQNPILRIVNVVGKSYKEIDFWSQENGFTTSLPTGKSEENATANTQSLAGVVQWPGNLQRTPKGWNMPVKQNPMKIAVPGRTSFSKFVKVDYGKNRDQNQYHGFCIEVFNKVLELLEYDLHYEFYPLNVTYPDLVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMIVSVKPQDSAWMFLKPFTWQTWAVVGTTLIYTMLVIWYLERVTNPEFQGNWKRQFSTALWFTFSSLFFAHREQMHSNLSRVVMGVWLLLVMVMTSSYTASLSSMLTVQQLQPNVTSIEWLKMNNMKIGCDGDSFVRTYLEKVEKFKSENIINISSEYNYDGVLKNNSIAAAFLEVPYEKVYISTYCKKYSGSTPTTRFGGLGFMFQKGSPVAKDVSKAILQLSEKGELTNLEAKWLKQSNECTNSSTSKDTQSLKLESFWVLFLISGITSTICLLFSIIQSQGSHLTQNMTQLGNGPTSDMTVWIRTLELAKRIYSRKLIQETHLYGPTTGAQVVNDCSSRWDYVSTTDSPMHQQDTASPAPTVIVLSSPPPETQMETPDNR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0650 942 Pfam Ligand-gated ion channel 798 828 IPR001320 GO:0015276|GO:0016020
Lele34g0650 942 CDD PBP1_GABAb_receptor_plant 39 419 IPR044440 -
Lele34g0650 942 FunFam Glutamate receptor 570 708 - -
Lele34g0650 942 PIRSF IGluLR_plant 7 871 IPR017103 -
Lele34g0650 942 Gene3D - 153 413 - -
Lele34g0650 942 Gene3D - 454 569 - -
Lele34g0650 942 Gene3D - 743 804 - -
Lele34g0650 942 Pfam Bacterial extracellular solute-binding proteins, family 3 484 797 IPR001638 -
Lele34g0650 942 FunFam Glutamate receptor 157 330 - -
Lele34g0650 942 Pfam Receptor family ligand binding region 64 399 IPR001828 -
Lele34g0650 942 CDD GluR_Plant 459 796 - -
Lele34g0650 942 SUPERFAMILY Periplasmic binding protein-like II 435 798 - -
Lele34g0650 942 SMART GluR_14 462 798 IPR001320 GO:0015276|GO:0016020
Lele34g0650 942 FunFam Glutamate receptor 456 570 - -
Lele34g0650 942 SUPERFAMILY Periplasmic binding protein-like I 36 452 IPR028082 -
Lele34g0650 942 Gene3D - 570 713 - -
Lele34g0650 942 Gene3D - 40 389 - -
Lele34g0650 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 839 - -
Lele34g0650 942 MobiDBLite consensus disorder prediction 906 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0650 Lele-ChrLele34 16080157 16084568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0650 10 835 Ion Channels AT2G29120 32.436 7.69e-143 447