Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0647 ATGGCAACGCCAAGCTTTGGTTTCGCGGTAATTGAGGAGGCGTCGTTGTCCGAGTCGAAGGATCCAAATTCGAATTACCAGATTAACCAGAAAAGTAGTGATCATCATCATGCAGCTGCAGATTCAGAAGCGATTCTTGAGAACATATGGGCTAGGGTTATGAGCAGTAATAATGGTGGAATAACAAAAGAAAATGCATTGGAAGGGCCTCCAAATCTTGAAGGAAGAGACAAAGCTATGGAGATTCTACAAAGGCTTCCAAGTTTGGGAAGATGGATATCAATGGGAGCTGAGGCATGGGAAGAGATTTTAGCTGATTTTCCACAAAACCTTGTTCTTGACAATCTGGGGATTTGCAGGAACATTAATGAATCCAACTATAAGAAGTTAGAACAAAAAGAGAAAGAAGGAGGAGGAGGTGGTAGTGCAGTGAGGGCAAAGAATAATAATAAGGAAGGTGAAAGTAGAACACATTACAGGGGAGTGAGAAGAAGGCCATGGGGAAAATATGCAGCAGAAATAAGGGACTCATCAAGGAATGGGGCTAGGGTTTGGCTTGGGACATTTGAGACAGCTGAAGAAGCAGCTTTAGCTTATGATAAAGCAGCTTTGAGAATTAGAGGTCCCAAGGCTTACTTGAATTTCCCTATTGAGACTGTTGCAAATGCTTTAGGCTTTGATCTCAAGGGTACTATTACCTCTTCTTCTTCTTCAACTAATTGTGAGGAGGATTATTCTGAAAATTGCAGCAATTCCAAGAAAAGAAGATTGAGAAATAGTGAAGAACCTGAAGCTAAAAGGATGGCGAATAATTTGGGGAATGAACTGGATGTTGTTGTGTTTCAGGACTTGGGGACTGATTACTTGGAGAGTTTGTTATCTTCTTTTTGA 891 0.4108 MATPSFGFAVIEEASLSESKDPNSNYQINQKSSDHHHAAADSEAILENIWARVMSSNNGGITKENALEGPPNLEGRDKAMEILQRLPSLGRWISMGAEAWEEILADFPQNLVLDNLGICRNINESNYKKLEQKEKEGGGGGSAVRAKNNNKEGESRTHYRGVRRRPWGKYAAEIRDSSRNGARVWLGTFETAEEAALAYDKAALRIRGPKAYLNFPIETVANALGFDLKGTITSSSSSTNCEEDYSENCSNSKKRRLRNSEEPEAKRMANNLGNELDVVVFQDLGTDYLESLLSSF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0647 296 Gene3D AP2/ERF domain 157 218 IPR036955 GO:0003700|GO:0006355
Lele34g0647 296 MobiDBLite consensus disorder prediction 131 161 - -
Lele34g0647 296 CDD AP2 157 217 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 Pfam AP2 domain 157 208 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 MobiDBLite consensus disorder prediction 19 39 - -
Lele34g0647 296 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Lele34g0647 296 MobiDBLite consensus disorder prediction 19 33 - -
Lele34g0647 296 FunFam Ethylene-responsive transcription factor 2 157 218 - -
Lele34g0647 296 PANTHER DNA-BINDING DOMAIN 128 291 IPR044808 GO:0003700|GO:0009873
Lele34g0647 296 SUPERFAMILY DNA-binding domain 158 218 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0647 Lele-ChrLele34 16050167 16051057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0647 154 295 AP2-EREBP Transcription Factor Family AT3G23240 50.350 1.91e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele34g0647 AP2 9.5e-16 CL0081