LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele34g0644	ATGGCTTCTTCTAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAATCCCCACCACCATCCATGGCAGCATGACATGAACCCCTCTCTCATCTCTTCTTCAACCTGCCACCGAACCCCTTACACTTCTTCTTCTTCCTCAGGGATGGTGAATCCTCCGAGAGATGAGATCCGAAAGATCAGAGCTCAGCTTCAAGAGTATGGTCAAGTTGGTGACGCTAATGTGTTTTACTGGTTTCAGAATCGCAAGTCCAGAAGCAAACACAAGCTTCGCAACCTCCAAAACAACAACAATAACACTAACACAAAAGAATCAACAACCCCACCACCACCTTCTCTCATCACTCAGATTCCACCTTCTAATTTTTCTTCATCTGATAACAACAAATCTTCTCCTTCTCCTTCTTCTTCCATGGAAATCATCACCACTATTGTCCCTCCTTTTAAGTCGTCGTCGTCGTCATCTTCATTCCCCATTAATGGCTTCTCTTCTGATGTAATCCTCCCAAGTTCTGTGAGTTTTCAGAATACCCATCATGAGACCTCTCTTTCTGAGCCTTTCTTCTTCCCTGTTACTGCTTCTTCGTCTTCTCCTTCTTCTGCTACAACTCATCATCAAGGGTTTTGCTTCTCTGAGCTCTCTGGTCTTGTTCAATCTCATCAACATCAACATCAAAACGTTGTTGGGCCTTGCACTAGTCTCTTGCTTAGTGAGATGACGAGTCAGAAGAAAGAACAAGATCATCATAATAATAAGGATCATATGAAGAGTTCTATAATGAATCATCATCATCTGAGTTTCTGTGTTGCAGCTTCGTCTTCTGTAACTCCCACCACCATTCACAGTACCGTTTTGCCTTCTACATCTCCTACTGCCACCACCAGCAACACCACTCCTACTGTTCCATCCCTCGTCCCCCAAATTCAAGGGGAGGAGGCAGGTTGCACGGTTGCAAAATCTATTGTATACATAAACGACGTCGCATTCGAAGTGGCTGTGGGTCCCTTCAACGTGCGGGAGGCTTTTGGTGAAGACGTGGTTCTGGTCCACGCGGCAACAGGACACCCTGTCCTCACTAACGAGTGGGGTGTCACCCTCCAGCCACTGCAGCACGGCGCATTTTATTATCTGGTGCGCACGTTAAGACCCTTTATGCCATAA	1167	0.4627	MASSNRHWPSMFKSKPCNPHHHPWQHDMNPSLISSSTCHRTPYTSSSSSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNNNNNTNTKESTTPPPPSLITQIPPSNFSSSDNNKSSPSPSSSMEIITTIVPPFKSSSSSSSFPINGFSSDVILPSSVSFQNTHHETSLSEPFFFPVTASSSSPSSATTHHQGFCFSELSGLVQSHQHQHQNVVGPCTSLLLSEMTSQKKEQDHHNNKDHMKSSIMNHHHLSFCVAASSSVTPTTIHSTVLPSTSPTATTSNTTPTVPSLVPQIQGEEAGCTVAKSIVYINDVAFEVAVGPFNVREAFGEDVVLVHAATGHPVLTNEWGVTLQPLQHGAFYYLVRTLRPFMP	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele34g0644	388	MobiDBLite	consensus disorder prediction	93	112	-	-
	Lele34g0644	388	MobiDBLite	consensus disorder prediction	89	140	-	-
	Lele34g0644	388	MobiDBLite	consensus disorder prediction	36	55	-	-
	Lele34g0644	388	MobiDBLite	consensus disorder prediction	119	140	-	-
	Lele34g0644	388	Pfam	Homeodomain	53	90	IPR001356	GO:0003677
	Lele34g0644	388	SUPERFAMILY	Homeodomain-like	53	93	IPR009057	-
	Lele34g0644	388	Coils	Coil	85	105	-	-
	Lele34g0644	388	PANTHER	WUSCHEL-RELATED HOMEOBOX 9	1	45	IPR044557	GO:0003700\|GO:0050793
	Lele34g0644	388	MobiDBLite	consensus disorder prediction	36	53	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele34g0644	Lele-ChrLele34	16028566	16031366	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele34g0644	1	97	Wox Gene Family	AT2G33880	58.537	2.70e-38	140

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-WOX	Lele34g0644		Homeodomain	2.4e-06	CL0123