Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0642 ATGGGCCAACGAAACACAGTGATTCTTCCGCTGTTGCTTCTGTTCCAAGTTCTGGTTGTAGGAGCACAGAACTCAAATCGAGACTTTACTGCTTTATCATCTCTCACTGAATTTTGGGAAAACAAGCCACCAAGTTGGGTGGGCACAGATCCTTGTGATGGTAGTTGGGAAGGCATTGACTGTACCAATTCAAGAGTGACCTCAATAAAATTGTTAGGCATGAACATTAAAGGCAGCTTGACAGAGGCTATTGGGAGATTAACTGAATTAAAGACTCTGGATCTCTCTTACAACAAAGACATGGGTGGAAGAATTCCAGATGAAATTGAGAATTTGAGAAAATTACAAACCCTGTCATTGGCTAACTGTGATTTCTCTGGTCCTATTCCTGAATCAATAGGAGCTCTTGAGCAGTTGACTTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGGAACATTCCACGTACGTTTGGAAATCTATCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTGTCTCTGATGAAGAAGGACCTGGTCTTGACATGCTACACAAAACAGAGCACTTTCATTTTGGAAACAACCGCCTCTCAGGGCAAGTTCAAGCTAAGCTTTTCAGCTCAAATATGATACTGAAACACTTGCTTCTTGACAACAATAAGCTAGATGGCAGCATTCCAGACACTATTGGATTAGTGAAGACATTGTCGGTGGTACGCTTTGATCACAATCAAATGAGTGGCGAAGTGCCTTCAAGTATCACAAATCTCACAAAACTCAGTGATCTGAATTTAGGCAACAATAATCTAAATGGCTCTATGCCTGATTTTACTGGATTAAATACACTGACCTCTGTGGATTTGAGCAACAACTCTTTTGATCCTTCCAGTATCCCTTCATGGGCTTCAAGTTTGCCATTTTTAACTATATTATCATTGGAAGACACCGGACTGCAAGGGGAACTACCTGACACCTTATTTAGCCAGTCTAATATAGAGACTGTGATACTGAGGAATAATCAGCTCAATGGTACCTTGGATGTTGGCAACTATAAATCCAATTTGGATCTTATTGATTTAGAGAATAATAAGATAACTGACTTTGCTCAGAGAAGTGAAAAAATCAGTTTTGAAGTCATACTTGTTGGCAATACCATTTGTCTTGAAACAGGAGTTGATAATAATAGCTATGAATTCAACGCAGAAGAGCCTGCATCAAGTAAAATAAGTACTGGGGTTATAGCTGGTGCAGTAGCTGCTGGTGTTGTCATTTTGGTACTGTCCATCCTTGTAGTAATATTTGCAATCCGCAAGAAGAAAAGAGCAAAGGAATTTAATCCTTTCGCAAACTGGGAACAGAACAATAACAGTGGTAATGCTCCTCAGCTAAAAGGAGCTCGCTGGTTTTCTTTCGAAGAGCTCAAGAAATACAGCAACAACTTTTCTGATGCCAATACTATTGGGGCTGGGGGCTATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGGGAACTGGTTGCCGTCAAGCGTGCTTCACAAGAATCTATACAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTGCGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCTAATGGCACTATAATGGACGGTCTTTCAGGAAAATCTGGTATTAGAATGAACTGGATAAGGAGGCTAAAAGTAGCTGTGGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTTGCTGATCCACCAATTATACACAGGGACATAAAATCAAGTAATATTCTGCTCGATGACCAACTAAATGCCAAAGTCGCTGATTTTGGTCTCTCTAAACTCAAGGATAGTGACAGGGGCCATATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTATATGACTCAACAATTATCAGAAAAGAGTGATGTTTATAGCTTTGGAATTACGATGCTTGAACTGGTAACAGCGAGGAAGCCAATAGAGCAAGGAAAATTCATTGTAAGAGAGGTTCAAAGGGTAATGGATAGATCAAAAGAGTTATACAATCTTCATGCCATTATAGATCCAATCATAAAGCAAGAAGGAACCCCAAAAGGTTTAGAGAAGTTTGTGGACATAGCATTGAAGTGTGTCAAAGATCATGCAGAAGAGAGGCCAATAATGGCTGATGTTGTGAAAGAGATTGAGAATATAATGCAACTTGCTGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAATCTTATGACTATGCCAGTGGTGGGAAGATCAACCATCCTTACGTTGATGAAGATTTTGCCTACACCGGCGTTTTTCCATCAGTAAAGCATTCCTCTTCACCTTCTCCACCTTCTTCTTCGTCTTCTTCAAGTGGGGTACCCCCTGAAATCAGAAGTGGCCATTCCAACAATCACGGCTCCAACCAATTCTCAGGCCACAAGGCTCATTATCCGAACCCACCTGATGCTGTGAATCCCGACGCTGCTACTCTCAGAGATCAATGGAGGTATGCCATCAAACAATACAGTAGATGGTACTCTCACGCCTGGGGCACTGCTATTCTAGCTGGCGCTGCCTTCTTTGCCCTTGGATGGGTCATCAAAGGCGGGAATCCCTTACCCTCTTTCCACACTGAGGAATCTTCGCCTGTATCTTCCTCCTCTGATTCGGAGAAACCTCGCCAGTAA 2772 0.4177 MGQRNTVILPLLLLFQVLVVGAQNSNRDFTALSSLTEFWENKPPSWVGTDPCDGSWEGIDCTNSRVTSIKLLGMNIKGSLTEAIGRLTELKTLDLSYNKDMGGRIPDEIENLRKLQTLSLANCDFSGPIPESIGALEQLTFLALNLNRLSGNIPRTFGNLSNVNWLDIADNQIEGPIPVSDEEGPGLDMLHKTEHFHFGNNRLSGQVQAKLFSSNMILKHLLLDNNKLDGSIPDTIGLVKTLSVVRFDHNQMSGEVPSSITNLTKLSDLNLGNNNLNGSMPDFTGLNTLTSVDLSNNSFDPSSIPSWASSLPFLTILSLEDTGLQGELPDTLFSQSNIETVILRNNQLNGTLDVGNYKSNLDLIDLENNKITDFAQRSEKISFEVILVGNTICLETGVDNNSYEFNAEEPASSKISTGVIAGAVAAGVVILVLSILVVIFAIRKKKRAKEFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYSNNFSDANTIGAGGYGKVYQAVLPSGELVAVKRASQESIQGAVEFKTEIELLSRVHHKNLVRLVGFCYDKGEQMLVYEYIPNGTIMDGLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDQLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQQLSEKSDVYSFGITMLELVTARKPIEQGKFIVREVQRVMDRSKELYNLHAIIDPIIKQEGTPKGLEKFVDIALKCVKDHAEERPIMADVVKEIENIMQLAGFNPNAESTSTSESYDYASGGKINHPYVDEDFAYTGVFPSVKHSSSPSPPSSSSSSSGVPPEIRSGHSNNHGSNQFSGHKAHYPNPPDAVNPDAATLRDQWRYAIKQYSRWYSHAWGTAILAGAAFFALGWVIKGGNPLPSFHTEESSPVSSSSDSEKPRQ 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0642 923 MobiDBLite consensus disorder prediction 903 923 - -
Lele34g0642 923 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Lele34g0642 923 ProSiteProfiles Protein kinase domain profile. 487 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0642 923 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Lele34g0642 923 PANTHER RECEPTOR-LIKE PROTEIN 55 33 758 - -
Lele34g0642 923 MobiDBLite consensus disorder prediction 805 842 - -
Lele34g0642 923 SMART serkin_6 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0642 923 MobiDBLite consensus disorder prediction 902 923 - -
Lele34g0642 923 Gene3D Phosphorylase Kinase; domain 1 457 562 - -
Lele34g0642 923 FunFam Leucine-rich repeat family protein 27 182 - -
Lele34g0642 923 SUPERFAMILY Protein kinase-like (PK-like) 470 767 IPR011009 -
Lele34g0642 923 CDD STKc_IRAK 493 758 - -
Lele34g0642 923 Gene3D Transferase(Phosphotransferase) domain 1 563 778 - -
Lele34g0642 923 SUPERFAMILY L domain-like 47 377 - -
Lele34g0642 923 Gene3D Ribonuclease Inhibitor 184 390 IPR032675 -
Lele34g0642 923 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Lele34g0642 923 MobiDBLite consensus disorder prediction 805 855 - -
Lele34g0642 923 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 563 772 - -
Lele34g0642 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Lele34g0642 923 FunFam Leucine-rich repeat protein kinase family protein 454 562 - -
Lele34g0642 923 Pfam Protein kinase domain 488 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0642 Lele-ChrLele34 15995612 16007506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0642 8 804 Receptor kinase-like Gene Family AT5G49760 39.958 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele34g0642 Pkinase 4.4e-47 CL0016