Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0624 ATGGGGGGTTTGATCGATCTCAACACTACGGAGGACGATGAAACGCCGTCGTCTCTCTCGTCGGCGGCTTCTTCTTCGTCCTCTCACTCGGGTGTTGTAACTACTACAACTACTACTTCGGCCCCTTCTCCTTCTTCTAACTCTGTGTGCTTGGAGCTATGGCACGCATGTGCGGGTCCAATGATCTCGTTGCCTAAGAAAGGAACCGTTGTTGTGTACTTCCCACAGGGCCACATGGAACAGCAGCTTCAGGATTTTTCGGTCGATGCCTGTAATATCAATTTCCCATCTCATATTTTCTGTCGCGTACTTGATGTTAAGCTCCATGCGGAGGAAGGGAGCGATGAAGTGTATTGCCAGGTCTCGTTGGTTCCTGAGAGAGAGGGGGAACGAAAACTGCCAGAAGGAGAACTTGACGCTGATTGTGAAGAGGAAGATGCTGATGCTGTGGTGAAGTCCACGACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCTGCTGAAGATTGCTTCCCTCCCCTGGACTACAGCCAACAGAGACCTTCCCAGGAGCTTGTAGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCCGGCATATTTACAGAGGTCAACCAAGGAGGCATTTACTCACAACTGGATGGAGTTCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTGTTTCTTAGGGCTGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAGAGTGGTGGTACTTTATCAGTGCCATCTGCTCATCAGTTGAATCCTAGCACTCTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCCTTTAATGTGTATTATAATCCCAGGGTTAGCTCATCAGGATTCATAATACCCCATCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAATGAGGTTCAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCACTGGATTGATTGTTGGAATGAGTGATGTAGATCCTATTAAGTGGCCTGGATCAAAATGGAAATGCTTGGTGGTCAGGTGGGATGACATGGAAGCCCCTAGGCATAATAGGGTTTCCCCTTGGGAGATTGAACCATCTAGTTCTGCTCCCAATTCCAATAATTTCATGGCCGCTAGTTTTAAGAGGAACAGGATTGGTCTGCCGTCAGAAAAGGCCGAATTACCAGTCCTGAATAGGATTGGAGGATCAGACTTTGGGGAATCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATATTGGGCATTAATACCCCATATGTTGGTATCAATGCTCAGAGTCACCAATTATCTGAAAGTAGGTGCTATCCTGGGTCAAACTGTTCCAGAATTGTAGCAACAGGAAATAATGTCAGGGTCCCACAAGCGAGTTCTGACATGTCATGCCGTGGCATAGGCTTTAATGAATCTTCACGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACAGAACCTTGTCTGTTAATGAGGCTCATAAAAATGGTTGCTTTGGAATCTTTGATGGATGTCAATTGCTGGGATCCAGAAATCAATGGTCTACACAGATGCTGGACAATTCTTCCCATATGCATCCATCTGGGCCAGTTTCATCCCCATCATCTGTTCTGATGTTCCAGCAAGCAGCTAATTCAGTTTCCAACTTTGATTATGGGAATAAAAGTAATCAAGAGATGGAGAGAAAAATGCACTACCTAGGTTTGTATGCTTCTGAAGTGAAAAGTAGAAAATTAGCACATTCGCCATTTTATGAGCCTGGTCACTGTGTGCAAGTGCAGGAAGGAACAAATTCCTTTGGTACGTCAAATTTTCATAATCATCTGGTCACAGCAAGTTCAGATGATTCTCTTTTGCCACTGACAGGTAGCCCAGAGTTGGTTTCCACATGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTAACCGGGGAAAATCATATTGCCCGTGAAGAAGCAGGCTCTTCTACAGTCACTTGTCAATTAAATTCTGGACCTTCCTTTATAAGACATGTTGGTGATGAACTTCCACTAGGCATTCACTCAGGAGCAAGGCAGCTGGAAGCAACAGTATCAAAGTAA 2181 0.4493 MGGLIDLNTTEDDETPSSLSSAASSSSSHSGVVTTTTTTSAPSPSSNSVCLELWHACAGPMISLPKKGTVVVYFPQGHMEQQLQDFSVDACNINFPSHIFCRVLDVKLHAEEGSDEVYCQVSLVPEREGERKLPEGELDADCEEEDADAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRAEDGELRLGIRRAAQLKSGGTLSVPSAHQLNPSTLMDVINALSTKCAFNVYYNPRVSSSGFIIPHHKFLKSLDHSYLVGMRFRMRVETDETTERRCTGLIVGMSDVDPIKWPGSKWKCLVVRWDDMEAPRHNRVSPWEIEPSSSAPNSNNFMAASFKRNRIGLPSEKAELPVLNRIGGSDFGESLRFQKVLQGQEILGINTPYVGINAQSHQLSESRCYPGSNCSRIVATGNNVRVPQASSDMSCRGIGFNESSRFQKVLQGQEILPSQPYRTLSVNEAHKNGCFGIFDGCQLLGSRNQWSTQMLDNSSHMHPSGPVSSPSSVLMFQQAANSVSNFDYGNKSNQEMERKMHYLGLYASEVKSRKLAHSPFYEPGHCVQVQEGTNSFGTSNFHNHLVTASSDDSLLPLTGSPELVSTCKSSCRLFGFSLTGENHIAREEAGSSTVTCQLNSGPSFIRHVGDELPLGIHSGARQLEATVSK 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0624 726 FunFam Auxin response factor 322 393 - -
Lele34g0624 726 Gene3D - 323 395 - -
Lele34g0624 726 SUPERFAMILY DNA-binding pseudobarrel domain 152 266 IPR015300 -
Lele34g0624 726 CDD B3_DNA 157 259 IPR003340 GO:0003677
Lele34g0624 726 Pfam Auxin response factor 286 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele34g0624 726 FunFam Auxin response factor 157 261 - -
Lele34g0624 726 Gene3D - 157 261 IPR015300 -
Lele34g0624 726 MobiDBLite consensus disorder prediction 10 46 - -
Lele34g0624 726 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele34g0624 726 MobiDBLite consensus disorder prediction 1 46 - -
Lele34g0624 726 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Lele34g0624 726 SMART B3_2 159 261 IPR003340 GO:0003677
Lele34g0624 726 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0624 Lele-ChrLele34 15808790 15815307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0624 45 696 B3 DNA Binding Superfamily AT5G60450 41.791 7.40e-148 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele34g0624 B3 1.1e-22 CL0405