Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0621 ATGACCTGGTGCAATGAATCATCAGATGAAGAGGAGCTTAATAATAATAAGGCGATTCAGGTTATTAATTCTCCCTCCATTGTTACTCCTCCTATTCAAGCTTCTGCAAATGATCAAGCCCTTGCAGCAGCAGCAACAAAACCCTCTGAAATTCTAACCATTACTTGCCCTTCATGCGGCCATAACATTCAACTCCAAGATCAGGGAGGGATTCATGAGCTGCCAGGGCTACCAGCAGGAGTGAAGTTTGATCCAAATGATATAGAGATATTGGAGCATTTAGAGGCCAAGGTTTTGTCTGATGTTCGTAAGATTCATCCTCTCATTGATGAGTTCATTCCCACTCTTGAAGGTGAAAATGGAATCTGCTATACTCATCCACAAAAGCTTCCAGGGGTAAGCAAAGATGGACAAATCCGTCATTTCCTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAGAGAAGAAAGGTTCACACAGACGAAGAAGGAAGCGAAACAAGGTGGCACAAAACAGGCAAAACAAGACCAGTCCTACGCAATGGTTCCGTAAAAGGTTTCAAGAAGATCCTCGTCCTCTACACCAACTATGGCAGACAGAAGAAACCAGAAAAGACCAACTGGGTTATGCACCAGTACCACCTCGGAACCAACGAGGAAGAGAAAGATGGAGAATTAGTTGTCTCCAAGGTTTTCTTCCAGACACAACCAAGACAATGTGGTTCCATTAATATGTTGATGAAGGACCCTTATGACCATCAAAAAGGGATGATACTAAACAAGAAGAATGATCATAACAACAACAACAATAATATTGATGATGACAGTTCAGAACAAGCAGCTTTTGTGGATTATTACAGTACTCCTCCTCCTTACTTAAGTTATGACCATTTGAGTCATCATCATGGTAACTCTGAAAGCTCTCCTCAACTTATTCCCAACTTGGTTGTTCAAGGTGACCATGCTTCTTCTCCCTTTTTTCGTCTGGCTATGGATCATTCAAACAAAGCAAGAGTACTTGACGGAAAAATATAG 1041 0.4159 MTWCNESSDEEELNNNKAIQVINSPSIVTPPIQASANDQALAAAATKPSEILTITCPSCGHNIQLQDQGGIHELPGLPAGVKFDPNDIEILEHLEAKVLSDVRKIHPLIDEFIPTLEGENGICYTHPQKLPGVSKDGQIRHFLHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVLRNGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKVFFQTQPRQCGSINMLMKDPYDHQKGMILNKKNDHNNNNNNIDDDSSEQAAFVDYYSTPPPYLSYDHLSHHHGNSESSPQLIPNLVVQGDHASSPFFRLAMDHSNKARVLDGKI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0621 346 Pfam No apical meristem (NAM) protein 78 217 IPR003441 GO:0003677|GO:0006355
Lele34g0621 346 MobiDBLite consensus disorder prediction 156 173 - -
Lele34g0621 346 FunFam NAC domain-containing protein 73 86 240 - -
Lele34g0621 346 SUPERFAMILY NAC domain 72 236 IPR036093 GO:0003677|GO:0006355
Lele34g0621 346 Gene3D NAC domain 87 240 IPR036093 GO:0003677|GO:0006355
Lele34g0621 346 MobiDBLite consensus disorder prediction 150 173 - -
Lele34g0621 346 ProSiteProfiles NAC domain profile. 77 236 IPR003441 GO:0003677|GO:0006355
Lele34g0621 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 49 280 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0621 Lele-ChrLele34 15761171 15765777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0621 1 336 NAC Transcription Factor Family AT1G28470 55.814 6.66e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele34g0621 NAM 3.9e-20 No_clan