Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0620 ATGAGCTTTAATATTGCTTATGATTTGTCAATCATTGTTCTGGCCATATTTCTCTTTGTTCTGGCCATAGTCCTCTTCTTCACATGCAAGAAGCAGAAACCAGTTCAATCTGATGAAAGGAAGGAAGGAGAAGAAGAAGATGATGAAGAACAACAAAAGAAAGCAGAGCCTGCAGTGAAGATCTGTGGTCGTGCGTACCCATTAATGGACATTGATGCTGCAACAGATGGATTCAACCAGAGGAGAATCATGGGCAAAGATTTCATAGGAACTTTATATGCTGGTGTTTTGGGAAGTGGACAACTTGTGGCTGTTAAAAGGATTCATCCTCTTCTTGTTCTCAGAAATGCAGGCTTGAGTGGCTTCTCTTCAGTTCTCAAATGCCTTTCTTCAGCTCAACATCCCAACATAGTTTCCATTATTGGCTTCTCAGAAGCACCAGGTGAGAGAATCATAGTGATGGAGTTTGTGGGCACATTGAGCTTAGATCTCTATCTTCATCAAAACCCAGATGGCAATTCACTCTTAGATTGGAACCAGAGGTTGAAAATTGCAGCAGGAACAGCAAGAGGGCTTCATTACCTTCATGAAATTGCTTCACCAAACATAGTTCATGGCTGTGTCAAATCCTCAAACATCTTAATAGATATAAACTTCTGTGCTAGGGTTTCTTATTATGGCCTCAACTTTCTTGCTCCCCAAGAAAAAAGAGCCCTCTTAGGTTATGTGGATGAAGAGTATTGGATCACTAATAATGGAAGAGGAGGAGGTAGTTGTAAAAAGAGTGATGTTTATGGATTTGGAGTGGTTTTGTTGGAGCTTTTGAGTGGAAAAGGTAGTGAAGAAGGTTTGTTGGTAAAGTGGGCTTTGCCCTTGATTAAAGAAATGAGGTATAGTGAAGTTTTTGACCCTGGGTTGGTTATTCCTTCAGAGATCAAGCCTCTGGTTAGGTTAGCTAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGAAAATGTAGGCCTTCCATCGCTCAAGTGTCAACCATTTTAAACCATTTAGAGAGGGAAATATGCCTCATGACATCTCAGAATAAGAGTATCTGA 1083 0.4044 MSFNIAYDLSIIVLAIFLFVLAIVLFFTCKKQKPVQSDERKEGEEEDDEEQQKKAEPAVKICGRAYPLMDIDAATDGFNQRRIMGKDFIGTLYAGVLGSGQLVAVKRIHPLLVLRNAGLSGFSSVLKCLSSAQHPNIVSIIGFSEAPGERIIVMEFVGTLSLDLYLHQNPDGNSLLDWNQRLKIAAGTARGLHYLHEIASPNIVHGCVKSSNILIDINFCARVSYYGLNFLAPQEKRALLGYVDEEYWITNNGRGGGSCKKSDVYGFGVVLLELLSGKGSEEGLLVKWALPLIKEMRYSEVFDPGLVIPSEIKPLVRLAKVASACVGNSRKCRPSIAQVSTILNHLEREICLMTSQNKSI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0620 360 Pfam Protein tyrosine and serine/threonine kinase 82 341 IPR001245 GO:0004672|GO:0006468
Lele34g0620 360 ProSiteProfiles Protein kinase domain profile. 78 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0620 360 MobiDBLite consensus disorder prediction 36 55 - -
Lele34g0620 360 SUPERFAMILY Protein kinase-like (PK-like) 62 343 IPR011009 -
Lele34g0620 360 PIRSF ILK 28 358 - -
Lele34g0620 360 FunFam serine/threonine-protein kinase-like protein ACR4 28 156 - -
Lele34g0620 360 FunFam Receptor protein kinase CRINKLY4 157 350 - -
Lele34g0620 360 Gene3D Phosphorylase Kinase; domain 1 36 156 - -
Lele34g0620 360 PANTHER OS01G0253100 PROTEIN 42 347 IPR045271 -
Lele34g0620 360 Gene3D Transferase(Phosphotransferase) domain 1 159 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0620 Lele-ChrLele34 15743399 15745594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0620 9 343 Receptor kinase-like Gene Family AT3G59420 35.097 4.31e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele34g0620 PK_Tyr_Ser-Thr 2.9e-22 CL0016