Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0619 ATGTCCACCATTCTTCTTCTTCTCCTTCTTCTTCCCTCCGTTCTCTCTCTCAACCAGGAGGGTCTCTATCTCTACCAGTTCAAGCTCTCTCTCGACGACCCAGACGCCTCTCTCTCCTCCTGGAACCCCCGTGATGTCACCCCATGTGCCTGGTCCGGCGTCACCTGCGACGCCGCCTCCAACTCCTCCGTTACTCGTCTCGACCTCTCCAACACCAACATCGCCGGCCCATTCTCCGCTTCCATCCTCTGCCGCCTCCCTAACCTCTCGTTCGTCTCCCTCTTCAACAACTCTGTTAACCAAACCCTCCCTTTAGATATCTCCTCTTGCCGCTCCCTCGTTCACCTGGACCTTTCCCAGAATCTCCTAACCAGTGAACTCCCACATACTCTGTCTCTTCTCCCCAATCTCAGATACCTGGACTTGACTGGAAATAATTTCTCGGGTCCTATTCCAGACTCATTTGGGAGCTTTCAGAAGCTTGAGGTTGTTTCTCTTGTGTCTAATCTTCTAGAAGGTACTATTCCCGCTTCTCTGGGTAATATTACGACATTGAAGATGCTCAATCTTTCTTATAACCCGTTTTTTCCGGGTCGGATCCCGCCGGAGATCGGGAACCTTACTAATCTGGAGGTGCTTTGGTTGACTCAATGTAACTTGGTTGGCACGATTCCCAACTCGATAGGGAAGTTGAAGAAGCTGAAGGATTTGGACCTTGCGTTCAATAATTTGTACGGTTCGATCCCGAGTTCGCTCATGGAGCTGACGAGTTTGAACCAGATTGAACTGTACAATAACTCGTTGTCCGGTGATTTGCCTAGGGGATGGTCGAACCTCACTGCATTGAGGCTGCTCGACGCGTCGATGAACCACTTGACGGGGACGATTCCGGACGACTTGTGTCATTTGCCACTGGAAAGCCTCAATCTCTACGAAAATCATTTGGAGGGGGAGTTGCCGGAGAGCATAGCGGACTCTCCGAATCTCTATGAGCTGAGATTGTTCGGGAACAGGCTCACCGGGAAACTTCCGGCGAGTCTTGGCAAAAATTCGCCATTACGTTGGATCGACCTGTCGACCAACCAGTTCTGGGGAGTAATTCCTCCTAGTTTGTGTGACCAAGGGCAGTTGGAGGAGCTTCTGATGATATACAATTTGTTTTCTGGTGAGATCCCGGCGAGTTTGGGGATGTGTCAGAGCTTGACACGAGTCAGGCTCGGTTACAACCGGTTGTCTGGCGAAGTTCCTGCGGGTATATGGGGGCTTCCGCATGTATATCTTCTGGAGCTTGTTCATAACTCTTTTTCGGGTCCAATTTCTTCAACTATTGCTGGGGCTGGGAATCTGTCGTTATTGATTCTTTCGAAGAACAATTTCAGTGGAGCGATCCCTGATGAGATTGGATGGTTGGAAAATCTTGAGGAATTTTCTGGGAGTGATAACAACTTTACTGGGGCATTGCCTGATAGTATTGTGAATCTTGGGCAACTTGGAACTCTTGATCTTCACAATAATAAACTCTCTGGCCAGCTCCCGAAAGGAGTGCGATATTTGAAGAAACTCAATGAGTTGAATTTGGCCAACAATGAGATTAATGGCAAAATTCCTGGTGAAATTGGAAGTTTGTCCGTGCTTAATTTTCTTGATCTTTCCCACAATCATCTTTCCGGGAAAGTTCCTCATGGGTTACAGAATTTGAAGCTTAACCAGCTGAATTTGTCTTATAATCGACTTTCTGGAGAACTTCCTCCTCAGTTGGCTAAGGATATGTACAGGAATAGCTTTATGGGTAATCCTGGTTTGTGTGGGGATCTGAAAGGTCTATGTGATGGAAGAAATGATGCTAAAAATACAGGTTACATTTGGTTGCTTCGAGCTATGTTCATCATCGCCACTTTGGTGCTTCTCATTGGTGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAACAACGCAAGAAGAGCTATCGATAAATCGAAATGGACTTTGATGTCGTTCCATAAACTGGGTTTCGGTGAAGATGAGATTCTGAACTGCCTTGACGATGACAATGTGATAGGAAGTGGATCATCAGGGAAAGTTTACAAGGTTGTACTTAGTAACGGGGAGGCGGTTGCTGTAAAGAAACTATGGGGAGTTGTCAAGACGGACATAGAGAGTGGTGAATTTGAGAAGGGCCAGGTTCAAGACAGTGCTTTCGATGCAGAGGTTGAGACTCTTGGCAAAATCAGGCATAAGAACATTGTTAAGTTGTGGTGTTGCTGTACTACTAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCTAATGGTAGTCTTGGAGATTTACTACATAGTAGTAAAGGTGGATTGTTGGATTGGCCGACAAGGTGTAAGATAGCAGTCAATGCTGCAGAAGGCCTCTCTTATTTGCATCATGACTGCGTTCCACCAATTGTTCATAGAGACGTGAAATCCAACAACATCTTGTTGGATGGTGACTTTGGTGCGAGGGTGGCTGATTTTGGAGTTGCTAAGGTTGTTGAAACTACTGCAAAGGGAGCTAAATCCATGTCTACCATAGCTGGCTCATGTGGGTACATTGCACCAGAATACGCATACACTCTCAGAGTGAATGAGAAGAGCGACATTTATAGCTTCGGCGTTGTCATACTCGAGTTAGTTACTAGGAGACGCCCGGTAGACGCTGAATTTGGGGAAAAAGACTTGGTGAAGTGGGTCTGCACCACCATAGATCAGAAAGGTGTGGATCATGTACTTGACTGCAGTCTTGATTCTTGTTTCAAAGAAGAGATCTGCAAGGTCCTCAACATTGGCCTAATGTGCACTAGCCCTCTTCCAATCAACCGCCCCGCCATGAGAAGAGTGGTGAAGATGTTGCAAGAAGTAGGCACAGACAACAACCACACGAAGGCATCGAAGAAAGACGGCAAGTTGTCACCATATTACTACGACGATGGCTCTGATCATGGAAGTGTAGCTTAG 2985 0.4673 MSTILLLLLLLPSVLSLNQEGLYLYQFKLSLDDPDASLSSWNPRDVTPCAWSGVTCDAASNSSVTRLDLSNTNIAGPFSASILCRLPNLSFVSLFNNSVNQTLPLDISSCRSLVHLDLSQNLLTSELPHTLSLLPNLRYLDLTGNNFSGPIPDSFGSFQKLEVVSLVSNLLEGTIPASLGNITTLKMLNLSYNPFFPGRIPPEIGNLTNLEVLWLTQCNLVGTIPNSIGKLKKLKDLDLAFNNLYGSIPSSLMELTSLNQIELYNNSLSGDLPRGWSNLTALRLLDASMNHLTGTIPDDLCHLPLESLNLYENHLEGELPESIADSPNLYELRLFGNRLTGKLPASLGKNSPLRWIDLSTNQFWGVIPPSLCDQGQLEELLMIYNLFSGEIPASLGMCQSLTRVRLGYNRLSGEVPAGIWGLPHVYLLELVHNSFSGPISSTIAGAGNLSLLILSKNNFSGAIPDEIGWLENLEEFSGSDNNFTGALPDSIVNLGQLGTLDLHNNKLSGQLPKGVRYLKKLNELNLANNEINGKIPGEIGSLSVLNFLDLSHNHLSGKVPHGLQNLKLNQLNLSYNRLSGELPPQLAKDMYRNSFMGNPGLCGDLKGLCDGRNDAKNTGYIWLLRAMFIIATLVLLIGVVWFYFKYRNFNNARRAIDKSKWTLMSFHKLGFGEDEILNCLDDDNVIGSGSSGKVYKVVLSNGEAVAVKKLWGVVKTDIESGEFEKGQVQDSAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRCKIAVNAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGAKSMSTIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTRRRPVDAEFGEKDLVKWVCTTIDQKGVDHVLDCSLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTDNNHTKASKKDGKLSPYYYDDGSDHGSVA 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0619 994 SMART serkin_6 680 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0619 994 Pfam Leucine rich repeat N-terminal domain 18 57 IPR013210 -
Lele34g0619 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Lele34g0619 994 Gene3D Ribonuclease Inhibitor 196 305 IPR032675 -
Lele34g0619 994 Gene3D Ribonuclease Inhibitor 306 612 IPR032675 -
Lele34g0619 994 Pfam Protein kinase domain 683 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0619 994 Pfam Leucine rich repeat 109 147 IPR001611 GO:0005515
Lele34g0619 994 FunFam Receptor-like protein kinase HSL1 664 767 - -
Lele34g0619 994 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Lele34g0619 994 MobiDBLite consensus disorder prediction 967 994 - -
Lele34g0619 994 FunFam Leucine-rich receptor-like protein kinase family protein 200 298 - -
Lele34g0619 994 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 17 182 - -
Lele34g0619 994 SUPERFAMILY L domain-like 39 298 - -
Lele34g0619 994 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 227 962 - -
Lele34g0619 994 Gene3D Ribonuclease Inhibitor 16 195 IPR032675 -
Lele34g0619 994 SMART LRR_typ_2 86 110 IPR003591 -
Lele34g0619 994 SMART LRR_typ_2 231 255 IPR003591 -
Lele34g0619 994 SMART LRR_typ_2 279 303 IPR003591 -
Lele34g0619 994 SMART LRR_typ_2 134 157 IPR003591 -
Lele34g0619 994 SMART LRR_typ_2 542 565 IPR003591 -
Lele34g0619 994 SMART LRR_typ_2 494 518 IPR003591 -
Lele34g0619 994 Gene3D Phosphorylase Kinase; domain 1 664 767 - -
Lele34g0619 994 Pfam Leucine Rich Repeat 209 231 IPR001611 GO:0005515
Lele34g0619 994 ProSiteProfiles Protein kinase domain profile. 680 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0619 994 SUPERFAMILY Protein kinase-like (PK-like) 676 961 IPR011009 -
Lele34g0619 994 SUPERFAMILY RNI-like 213 574 - -
Lele34g0619 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 977 - -
Lele34g0619 994 MobiDBLite consensus disorder prediction 968 983 - -
Lele34g0619 994 Gene3D Transferase(Phosphotransferase) domain 1 768 986 - -
Lele34g0619 994 FunFam Receptor-like protein kinase HSL1 304 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0619 Lele-ChrLele34 15735144 15738309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0619 12 994 Receptor kinase-like Gene Family AT1G28440 71.082 0.0 1426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele34g0619 Pkinase 6.6e-42 CL0016