Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0599 ATGGAAACAAGCAGAGCTGAGGGAAAGAGGAGCTCGTGGTACAAGAAAGAGGAAGCAGAGGAGGAGGAAGACGAAGAGGAAGAAGTAGAAGTAGAAGAAGAAGACGATGAAGAAGAGACAGAGAGTGAACTTGGCTCTGCAGAAGAACATGGCAGAAATAAGAGAAGGGTTATATCAAATACACACAGCAGCAGGAGAGGCCCCAGACCAGGAAGCTCAGCCGCGGCGTCACAACCTTGTTGTCAGGCCGACAATTGCCACACTGATCTGAGTGACGCCAAACAGTATCACCGGCGGCACAAGGTCTGTGAGTTCCACGCCAAAGCACCGGTCGTACTCATTTCAGGGAATGAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAACGGAGTTGTAGAAGGCGTTTGCAAGGGCATAATGAGAGGCGACGAAAGGTTGCATCTGATTGTCATGGAGAAGAAGATTTGATAAGAAAATTATTTTTTGAAGGCAGCATGCAAGATCAAGGTCAAGATTCCACCACCGTTAATGGCAGATCGGAGACCGTAGCTATTGAAGGAGACATTAAGGGAACTTAG 606 0.4719 METSRAEGKRSSWYKKEEAEEEEDEEEEVEVEEEDDEEETESELGSAEEHGRNKRRVISNTHSSRRGPRPGSSAAASQPCCQADNCHTDLSDAKQYHRRHKVCEFHAKAPVVLISGNEQRFCQQCSRFHELSEFDNSKRSCRRRLQGHNERRRKVASDCHGEEDLIRKLFFEGSMQDQGQDSTTVNGRSETVAIEGDIKGT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0599 201 Coils Coil 14 39 - -
Lele34g0599 201 MobiDBLite consensus disorder prediction 18 44 - -
Lele34g0599 201 ProSiteProfiles Zinc finger SBP-type profile. 78 155 IPR004333 GO:0003677
Lele34g0599 201 SUPERFAMILY SBT domain 79 158 IPR036893 GO:0003677|GO:0005634
Lele34g0599 201 MobiDBLite consensus disorder prediction 1 17 - -
Lele34g0599 201 MobiDBLite consensus disorder prediction 63 80 - -
Lele34g0599 201 Gene3D - 71 142 IPR036893 GO:0003677|GO:0005634
Lele34g0599 201 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 156 IPR044817 GO:0003677
Lele34g0599 201 MobiDBLite consensus disorder prediction 1 80 - -
Lele34g0599 201 Pfam SBP domain 81 154 IPR004333 GO:0003677
Lele34g0599 201 FunFam Squamosa promoter-binding-like protein 14 72 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0599 Lele-ChrLele34 15516797 15520692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0599 74 158 SBP-box Gene Family AT2G33810 70.588 1.94e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele34g0599 SBP 1.6e-32 No_clan