Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0596 ATGGTAGTCATCCCTCAAAACACTAAAGAATGGCCACAGCTTGAGATAATAGATGATCAAAACGTGTCCACGATGGCTTCTTCTTCTTCTTTTGCCTCTGCTCATCATCAAAGGGTTATGGAAAAACCAAACCAAGAACTTCTTCAACAGCAACAAGAAGCTCTCAAGTGCCCTCGATGTGACTCATCGAACACCAAGTTCTGTTACTACAACAATTACAGCTTGTCTCAGCCTAGATATTTCTGTAAAGCCTGCAAACGATACTGGACTCGTGGAGGTACCTTGAGGAATGTTCCTGTTGGTGGAGGTTGCAGAAAAAACAAGCGTGTTAAGCGTCCTTCTTCTTCAGCTTCTTCAGAAACTCATAATATTACTTCTAATTCTTCTTCTACTGCTACTGTCTCAGCTACTGTTTCAAACCCTCCTTCCCAATCTCAGATCGATGTTGCTTCCACCTCTAATCACATCAATCCTTTATTTTATGGCATGAATCTTCCGGCGTTTCCAAGTTTCAATTCCAGTACTTCTGGGTTTGATCATCATCATCTTCAACCTCATCAGATGAATCATCATTCCCTTGGATTAGATTTCACTGATGTTAATGGTTACCGAAATGGGTTTTCTTCTTCAAATCATCATACACGTCTTGCAAGTTATAGCTCTTCCATCTTTGCTAATTCTTCTTCTTCAGCGTCTATAACCACATCATCCAGTCCTATTATGGCTTCACTCTTCAGCTCTACGAATCTGCAGCAACAAAAGTTCATCAATGGTGGTGGGGCTAATCACAGTGCTTTTCATCAGGGGTTCACACAACTAGAAGATCTGGCTATAGCAGGCAATAATAATAATAATAATAGCACAAGTACTACTGAGGCAGAGATGGTTGCTTTAAAAGAAGTGAAATCTGTGGTGGTGGAAGATGATAATAACAGCTTTCTGGGGTGGCAAAATAATCAGATCGATCATCATCATCAAGCAACAGGCTTGTCTGATCCTTCATCACTTTACTGGAACGCTGCAACAGCTTTGGGTTCTACTACTTGGAATGATCAAAATATTGGTCCTCATCAGTCACTTCTCTCATCTGATCTACAATGA 1101 0.4069 MVVIPQNTKEWPQLEIIDDQNVSTMASSSSFASAHHQRVMEKPNQELLQQQQEALKCPRCDSSNTKFCYYNNYSLSQPRYFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPSSSASSETHNITSNSSSTATVSATVSNPPSQSQIDVASTSNHINPLFYGMNLPAFPSFNSSTSGFDHHHLQPHQMNHHSLGLDFTDVNGYRNGFSSSNHHTRLASYSSSIFANSSSSASITTSSSPIMASLFSSTNLQQQKFINGGGANHSAFHQGFTQLEDLAIAGNNNNNNSTSTTEAEMVALKEVKSVVVEDDNNSFLGWQNNQIDHHHQATGLSDPSSLYWNAATALGSTTWNDQNIGPHQSLLSSDLQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0596 366 MobiDBLite consensus disorder prediction 114 149 - -
Lele34g0596 366 Pfam Dof domain, zinc finger 53 109 IPR003851 GO:0003677|GO:0006355
Lele34g0596 366 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 252 IPR045174 GO:0003700|GO:0006355
Lele34g0596 366 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
Lele34g0596 366 MobiDBLite consensus disorder prediction 100 149 - -
Lele34g0596 366 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0596 Lele-ChrLele34 15459044 15460378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0596 55 170 C2C2-Dof Transcription Factor Family AT1G28310 59.200 6.08e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele34g0596 zf-Dof 1.5e-33 No_clan