Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0595 ATGAATGTTCAAGAAGGTGGTAGTGGAGACGATGGTGGAGGAGGGGGAGGACAGGTGAATGACCAAGTTCATCTTCAGCCGCCGCCACAGCCTCCCCCGCGGCAGAGATGTCCTCGTTGTGACTCTGTGAACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCGCAGCCTCGGTACTTCTGCAAAACGTGTAAGAGGTACTGGACCCATGGAGGATCCTTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAGCGGACCAAAGTGTCGTCGGCTTCGTCCTCATCGGCTGCCCGGCAGCGGATGAGCTTTCCACAACAGCTGCAACAACCTCGGCTGCAAGAGGTGATCCCTACTCAACCGAACCTGATGATGTCTCCTCCAAGCGTTCTCGTCGGTGGTCGTTCTTCTGCGGTGGTGGCACCACCGGTGGTTCCTTTGATCAGTTCCTTCAATCAAGGTGGTGGATATCAATCATCTCTGGCGGCGATTCACTCCCAAAACCCATTATCACAACCGTTATTCGATCTGTCGTCTCTGAATCTTGGTCCTTCCAATATGGGTCACCTTCCTTGTTTCAATGCTCCGTCGACTCAGTCCTCAAAGCGCCATATTCCTTCGTTGTCACCGGTGGTGCTCCAATCGGGAAACAGAAGCAGGGAGGTAGAATCTTTGTACGCATCTGATCATCAAGGTCTGGTTCAAACGAGCATGATGATGATGAATATGGGTAACAGCAGTTTCGCTTCTCTTCATGATTGGTCTCAAAACTCTCTGTGGAGTACCGTAAGCACAACTTCCATTGGAGACAATTCTGGGAATACAAGTAATAATGATGATAATAGTCATGATAATAACGCTAAAGCTGGATCATCATCTTCTCCGAGTGGAAACAAATGGCCTGATGACCTACCAGGGTTTGGTCCTCCTCCATAA 945 0.5016 MNVQEGGSGDDGGGGGGQVNDQVHLQPPPQPPPRQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKVSSASSSSAARQRMSFPQQLQQPRLQEVIPTQPNLMMSPPSVLVGGRSSAVVAPPVVPLISSFNQGGGYQSSLAAIHSQNPLSQPLFDLSSLNLGPSNMGHLPCFNAPSTQSSKRHIPSLSPVVLQSGNRSREVESLYASDHQGLVQTSMMMMNMGNSSFASLHDWSQNSLWSTVSTTSIGDNSGNTSNNDDNSHDNNAKAGSSSSPSGNKWPDDLPGFGPPP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0595 314 Pfam Dof domain, zinc finger 35 89 IPR003851 GO:0003677|GO:0006355
Lele34g0595 314 MobiDBLite consensus disorder prediction 90 112 - -
Lele34g0595 314 MobiDBLite consensus disorder prediction 273 302 - -
Lele34g0595 314 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Lele34g0595 314 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 264 IPR045174 GO:0003700|GO:0006355
Lele34g0595 314 MobiDBLite consensus disorder prediction 1 38 - -
Lele34g0595 314 MobiDBLite consensus disorder prediction 273 314 - -
Lele34g0595 314 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Lele34g0595 314 MobiDBLite consensus disorder prediction 80 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0595 Lele-ChrLele34 15437398 15438342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0595 29 109 C2C2-Dof Transcription Factor Family AT5G60200 69.512 1.18e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele34g0595 zf-Dof 1e-31 No_clan