Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0591 ATGAATATGATGCCGCCATACAAACAAGAAAAAGATGACGATATTGAAGATGAAGCATCTTTGGGTAAGTTAATTGATGAGATACTGCAAGAATCTTCACACAACAACAACAACAAGCTCTCAACTATGTGCTGCAGCAATAATGTTGTTGTTGGAGGCTCATCAAATGGAACATTAGGTCAAGTGGCCCCCAAATCCTCCTCCTCCTCCTCCTTCCAAGATGGCAGGGATGATTTCTTTGAAGGCCTTGACATGCCTCATTATTGGGTCTTTGACATTGTTCATGACACTCTCGGCTTAGTTCGGACTGAATTTCCTCATACAGTATATTTCATGGCAGGGACTCAGCTTCATGGAATTATATTGGAATTTTTAAAATATCAAATATCACTGGTAAAAGACGTGAAACTGGTGCCTAAACCTGCAGCTGATGACGGTGAAATGGATAGTGACAATAGCCATAGTGAGGATGATAGTGATGATGAAAATCTTGATAGTTCTAAGTCTCGCATTTTGCAGGCAATATCTTTGGTGTATCAACCGCATACGCTCATGACTCAAAATCCTCATATATGTGCAGCTTGGGCGGATATTGGCTATGTACAGGTCTGGGACTTCAAATCTCATCTGAATGCTCTAGCAGAATCAGAAACTGAAGGCGTCCAAGGAGCAGCTTCAGTTTTTAATCAGGATCCACTGTCTAAGTTTAAGCATCAAGATGAAGCAACCTGGAATGTTGACAAAATGAATGTTGCACATAAAGCAAGTGTTGAAGATCTACAGGTGAGCACATTACGTGCAAAGAAACATGAGCTCTTTGTATTTAAAGTATATCCAGTCTGCAGTCTCATTTCTGATAAAAGCAGTTTTCTACTCTATTTTAAATATTTCATTCTTCCTTGCAGTGGAGTCCCAGAGAACCTAGTGTTTTTGCTTCTTGTTCTGTTGATGGAAGTATTGCAATATGGGATATCTGTCTCGGGAAGTAACTGGCTGGCCAGTTGCATGTTGGCCTCTGGGAGTGATGATGGGACGTTTTCTATCCGTGATCTTAGATTGCTCAAGGATGGAGATTCTGTGGTAGCACATTTTGAATACCATAAGCATCCAATCTCATCCATCGAGTGGAGCCCACATGAAGCTTCTTCTTTGGCTATTTCATCATCTGATAATCAGCTCATGTGGAAAACATGTCTCAAAAGATTATTGACCAAAAAGTTGAAACCCAGTGACATTGGCTTCCTAAGTCGTATTGTTCTTCCAAAGAAGGAGGCAGAGGAAAATCTTCCTACTCTCTCCTGCAAGGAAGGCATTGAAGTTGTGCTTAAGGATGTATACACCGATCGTCAATGGAGCATGAAATACAAGTACTGGTATAATAATAGTAGCAGAATGTATATTCTGGAAAATACAGGGGATTTTGTGATGCATTATGGATTTCAAGTTGGAGATTCTCTAACACTGTATGGGGATGAGTGTAAAAATCTGACACCAAAAGTGGCTGAGCCGCCATTAGCAAGCAAAGAAGGAGAGCAACAAGTGAACGCAAACAATCATATCAATGATGAAGAGGAAGAGGAAGTATCTTTTGCTATGTTAATGGATGAACTCAACCAAAAAGAGCAAGAAAATGCAAACAATAATGGAGGTTCTTCAAATACAACATTACACCACAATAATGCATCATCCAAGAAAACAAGTGAAGAAAGCTTAGATGATTTCTTTGAAGGCCTTGACATTTCACAATTTGGGTGTAACTTTTTTCCTTGA 1770 0.3977 MNMMPPYKQEKDDDIEDEASLGKLIDEILQESSHNNNNKLSTMCCSNNVVVGGSSNGTLGQVAPKSSSSSSFQDGRDDFFEGLDMPHYWVFDIVHDTLGLVRTEFPHTVYFMAGTQLHGIILEFLKYQISLVKDVKLVPKPAADDGEMDSDNSHSEDDSDDENLDSSKSRILQAISLVYQPHTLMTQNPHICAAWADIGYVQVWDFKSHLNALAESETEGVQGAASVFNQDPLSKFKHQDEATWNVDKMNVAHKASVEDLQVSTLRAKKHELFVFKVYPVCSLISDKSSFLLYFKYFILPCSGVPENLVFLLLVLLMEVLQYGISVSGSNWLASCMLASGSDDGTFSIRDLRLLKDGDSVVAHFEYHKHPISSIEWSPHEASSLAISSSDNQLMWKTCLKRLLTKKLKPSDIGFLSRIVLPKKEAEENLPTLSCKEGIEVVLKDVYTDRQWSMKYKYWYNNSSRMYILENTGDFVMHYGFQVGDSLTLYGDECKNLTPKVAEPPLASKEGEQQVNANNHINDEEEEEVSFAMLMDELNQKEQENANNNGGSSNTTLHHNNASSKKTSEESLDDFFEGLDISQFGCNFFP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0591 589 SMART B3_2 403 504 IPR003340 GO:0003677
Lele34g0591 589 Gene3D - 404 510 IPR015300 -
Lele34g0591 589 SUPERFAMILY DNA-binding pseudobarrel domain 402 498 IPR015300 -
Lele34g0591 589 CDD B3_DNA 409 489 IPR003340 GO:0003677
Lele34g0591 589 MobiDBLite consensus disorder prediction 542 561 - -
Lele34g0591 589 PANTHER GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1 91 241 - -
Lele34g0591 589 SUPERFAMILY WD40 repeat-like 182 393 IPR036322 GO:0005515
Lele34g0591 589 MobiDBLite consensus disorder prediction 542 568 - -
Lele34g0591 589 ProSiteProfiles B3 DNA-binding domain profile. 403 504 IPR003340 GO:0003677
Lele34g0591 589 Pfam B3 DNA binding domain 404 499 IPR003340 GO:0003677
Lele34g0591 589 Gene3D - 82 275 IPR015943 GO:0005515
Lele34g0591 589 MobiDBLite consensus disorder prediction 142 165 - -
Lele34g0591 589 Gene3D - 320 403 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0591 Lele-ChrLele34 15399576 15410095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0591 399 569 B3 DNA Binding Superfamily AT1G28300 44.693 1.12e-34 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele34g0591 B3 2.4e-12 CL0405