Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0586 ATGGCGGAAAACCCTAGTTCTTCATCATCAAGAACTGACAGAAAATTCATCGAGAGGAATCGCAGATATCAAATGAAGGCTCTCTACTCCAAGCTCAAATCTCTTGTGCCTCGTCAAACTCCAACGGTGGCTATTCCATTACCTGATCAGTTAGAGGAAGCGACCAATTACATCAAGAAGTTACAGATGAAGTTGGAGAAAATGAAGGAGAAGAAGGACAACCTAATTGCAATTAACAATCAAAGGTCAAATTCCATCAAACATAGAAAAATGATTAAGAAATCATCAAAATCACCATGGTTTGAGATCAAAGAAGTGGGTACTATAGACTTACAAGTTGTTCTGAGAACTGAGTTGGATAGTGAGTTTTCGTTCTCTGATATCATTCGTCTTCTTCATGAAGAAGGAGCAGATATTGTTACTGCTAATTACACAGTTGTTGAAGATGTAGTTATTCGTACAATATACTGTGAGGTAGAGGAATCTGTCAACGTTGTAGCTGCAATGATATCTGAGAGATTAAGGAGATTGTAG 534 0.3783 MAENPSSSSSRTDRKFIERNRRYQMKALYSKLKSLVPRQTPTVAIPLPDQLEEATNYIKKLQMKLEKMKEKKDNLIAINNQRSNSIKHRKMIKKSSKSPWFEIKEVGTIDLQVVLRTELDSEFSFSDIIRLLHEEGADIVTANYTVVEDVVIRTIYCEVEESVNVVAAMISERLRRL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0586 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 76 IPR036638 GO:0046983
Lele34g0586 177 SMART finulus 15 67 IPR011598 GO:0046983
Lele34g0586 177 Coils Coil 51 78 - -
Lele34g0586 177 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Lele34g0586 177 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 176 IPR015660 -
Lele34g0586 177 Gene3D - 2 91 IPR036638 GO:0046983
Lele34g0586 177 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0586 Lele-ChrLele34 15322764 15324785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0586 6 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.575 1.08e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele34g0586 HLH 4.6e-08 No_clan