LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele34g0546	ATGGATGGTACCTCTGCAACTAAAGGAACCCATGAGGTTGTTCTTAATGTCAATGACAAATCTAATGAAGGCTCCATCATCTCTGTCTCTGTCCCTTTCTTACAGAAGTTGGTGGCAGAGTTGTTGGGGACATACTTTCTGATATTTGTAGGGGGAGCATCAATAGTGGTGAACAATAACAACAACATCGTAACGCTTCCTGGGATTGCCATCGTTTGGGGTCTTCTGGTACCAGCTTATATATTAATTCAGGTTCTAGGATCCACTCTTGCAAGTATGACTCTGAGACTTGTTTTCACAGGAAAACATGACCAATTCATTGGAACATTATTATCTGGGTCATATCTTCAGGGCTTTGTGGTTGAATTCTTGATCACCTTCTACCTCATGTTTGTCATCTCGGGTGTGGCAACTGATAGCAGAGCGATTGGTGAGCTAGCTGGGATCGTCGTAGGGGCAACCGTGTTGCTTAATGTGTTGGCTACCGGCCCCATCCCACAAAACTATAAACAAGAAAACACTTTACCTTCTCTTTCGCTACCACCACCACCACCACCACCTTCACCTTCACCTTCTCTCTGTTCACAGAGAAAAAGGGAAGATTCAGAAGAAGAAGAAGACGCTCCGTATGCAACAACAATGGCGAAAGAGAAGAAACTCTTTGTTGGGTTATTAGCAAACTACACAGCAGAGCTCAAGCTTCTTCTCACAACTCTTCTGGTTCTTTGCTCTGTCGCCACTCTTCTTCAGTTCATTCCTTCTCGCTTCACCATCTCTGCTTCTGATCTCCGTGTTTGCATCTCACGCGTCTCCCAACCCCAAGGCCCACCTTCTTCCTCCTCCTCCTCGGAGTCTGCCCAATTATCTAGATTGCTTTCTGTACCACCGTCGCCGCCGCCGACGTCACCGTCACCGTCACCGACACAGCCGGCCTCTGACGATGGATTAATCAAGCGGGATTTTCATCCTTATGGTTCTGCAGCTTACAACTTCATCACCATGGGTGCTTACAGAGGAGGTCTGAACACATTCGCCATTGTGGGACTCTCTTCGAAGCCGCTCCATGTCTACGGCAAGCCGACCTACGAGTGTGAGTGGACCCCGCTCGACAACACTACAGCGAAACCCATAACCACGGTCGCGTACAAGATGCTTCCTGATTGGGGCTACGGCCATGTCTACACGGTGGTGATTGTGAACTGTACCTTCTCGGAGCCGGTCAATGCCGACAACTCCGGCGGGAAATTGGTCCTCTACGCCTCCACATCCGGCGGCGGTGACGCCAATTTCAACCTCACGGATAGAATCGAAGTCCTCATGGAGTCGCCGGGAAGTCTAGACGTTTCCATTTTCACCTCGCGGCCCAAGTACGACTACTTCTACTGTGGATCGTCATTATACGGAAACTTGAACCCTCAGAGAGTTAGAGAATGGATCGCTTACCATGTGAGGCTCTTTGGACCCAGATCGCACTTTGTGATTCATGACGCCGGTGGGATCCACGAGCAAGTTCTTGAGGTTCTGAAGCCATGGATGGAACTTGGGTATGTGACGTTGCAGGATATTAGGGATCAAGAGAGATTTGATGGGTATTATCACAATCAATTCATGGTAGTGAATGACTGTTTACATCGATACAAGTTTAGGGCAAGGTGGATGTTCTTCTTTGATGTTGATGAGTACATTTATGTGCCACCTAAAAGCACAATCAAAACTATTCTCGATTCGCTTTCTGAGTATTCTCAATTGACCTTTGAACAAATGCCCATGAGCAGTAAGATTTGCCTCTCTGAAGATTACGGCAAAACTTACAGGAAGTGGGGATTTGAGAAACTAGTGTACAAAGACGTGAAGAGAGGAATAAGGAGGGACAGGAAGTACGCAGTACAACCTCGTAATGTGTATGCAACAGGAGTTCACATGTCCCAAAACTTAGCCGGAAAAACAACCCACAAAACTGAGGGAAGAATCAAATACTATCACTATCATGGAACCATTGCTGCCAGAAGAGAAACCTGCAAAATGCTCGAAAATTCCACTGAGCTCTACCACGAGAAGATCCCTTATGTTCTAGACACCACCATGAGAGACATCGCCGGCGTCATCAAGAAATTTGAACTCAAAATGATCGGTTCCAGGTTACAGAACGTTCATCAATAA	2160	0.469	MDGTSATKGTHEVVLNVNDKSNEGSIISVSVPFLQKLVAELLGTYFLIFVGGASIVVNNNNNIVTLPGIAIVWGLLVPAYILIQVLGSTLASMTLRLVFTGKHDQFIGTLLSGSYLQGFVVEFLITFYLMFVISGVATDSRAIGELAGIVVGATVLLNVLATGPIPQNYKQENTLPSLSLPPPPPPPSPSPSLCSQRKREDSEEEEDAPYATTMAKEKKLFVGLLANYTAELKLLLTTLLVLCSVATLLQFIPSRFTISASDLRVCISRVSQPQGPPSSSSSSESAQLSRLLSVPPSPPPTSPSPSPTQPASDDGLIKRDFHPYGSAAYNFITMGAYRGGLNTFAIVGLSSKPLHVYGKPTYECEWTPLDNTTAKPITTVAYKMLPDWGYGHVYTVVIVNCTFSEPVNADNSGGKLVLYASTSGGGDANFNLTDRIEVLMESPGSLDVSIFTSRPKYDYFYCGSSLYGNLNPQRVREWIAYHVRLFGPRSHFVIHDAGGIHEQVLEVLKPWMELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFRARWMFFFDVDEYIYVPPKSTIKTILDSLSEYSQLTFEQMPMSSKICLSEDYGKTYRKWGFEKLVYKDVKRGIRRDRKYAVQPRNVYATGVHMSQNLAGKTTHKTEGRIKYYHYHGTIAARRETCKMLENSTELYHEKIPYVLDTTMRDIAGVIKKFELKMIGSRLQNVHQ	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	270	315	-	-
	Lele34g0546	719	Pfam	Glycosyltransferase family 92	458	696	IPR008166	-
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	270	292	-	-
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	177	192	-	-
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	172	211	-	-
	Lele34g0546	719	Gene3D	Glycerol uptake facilitator protein.	28	169	IPR023271	-
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	196	211	-	-
	Lele34g0546	719	MobiDBLite	consensus disorder prediction	293	307	-	-
	Lele34g0546	719	Pfam	Major intrinsic protein	77	165	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lele34g0546	719	SUPERFAMILY	Aquaporin-like	29	165	IPR023271	-
	Lele34g0546	719	PANTHER	UNCHARACTERIZED	239	676	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele34g0546	Lele-ChrLele34	14442513	14452645	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele34g0546	22	163	Major Intrinsic Protein MIP	AT4G18910	54.891	9.14e-52	177