Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0466 ATGAAATGTTTCTTACTCTTCTTCTTCCTTATCATTACCTTCCTCTGTTCGTCTACCATTATTGAAGCTCGACCTACTTATCTTTACCACAACTGCTCCACCGCCAGCAAAACCTTTTCTTCTAATAGCACCTTCCGATCCCACCGGACCACCCTCCTCTCCTCCTTAGCTTCCGCCAATGCCGGCTTCTCCAACACCACCGTCCCCGGAGGCGGCAGTGACACCATCTACGGCCTCTTCATGTGCCGGGGCGACGTCTCCCTCCCGGTGTGCCGCCAATGCGTCGTTAACGCAACCCAACGGCTACCTTCCGAGTGCCCGTTTTCGAAGGAGGCCGTAATCTGGTACGACGAGTGCATGCTTCGCTATTCTGACACCTCTTTCTTCTCCACCATTAACAAATGGCCGACCGTCGTCATGTTGAACCCGAACAATATCTCTGATTCGAACCAGGCAAGATTTAATAGTTTTTTGCGGAGTTTTATGAATGAGACGGCAAGTAAGGTGGCGGCAAAATCTGCGGCGTTGTCGACGGAAGAGGGGACGGCGTATGTGAAGAACCAAGCAGATTTTGAGAATAAAACTCTGTACAGTCTAGCTCAGTGCACGCCGGACCTACCAATTGAAGATTGCAGAAGTTGTTTGAGTGGTGTGATCGGGAACATGCCGTCGTGTAGTGAGGGGAAGATCGGAGGAAGAGCTGTGAATCCCAGTTGCAATGTTCGCTACGAGTTGTTTTCATTCTATGATTCTAATGAGCAACTCGGTCCGACTCTGTCGCCGGCACCGGCCCTGACTCCGACAGGTAGACCGAATCCATTTTTCCCTCGAACCAATTCTTCAAATCATCCTCCACCTCGACCTCCAGCAAAGACAATTGTGATAGTTGTGGCTTCTCTTCTTGTTGGGGGAATAATTTTTTATTTGGCTTACTGTCTCTTAAAGATTCGAATAAAGAAGAGTCATAGGGCTAATCTCAGACAAAAATACTTTGGAAGGGAAAGCACAACTTTAGAGCATCTGCAATTTAATCTAGCTACAATTGAGTCTGCGACAAATAAGTTTTCTCATGACAATAGTTTAGGGAGAGGTGGATTTGGACAAGTTTACAAGGGTATTCTTTCAAATGGCCAAGAAATAGCTGTGAAGAGACTTTCAAAAAGTTCTGGCCAAGGTGCAGAAGAGTTTAAGAACGAGGTTTTATTAATAGCTAGACTTCAGCATAGAAATTTGGTGGCCTTATTAGGATTCTGCATTGAAGAGCAAGAGAAACTACTTGTTTATGAATATGTTCCTAACAGAAGCCTTGACTACTTTTTATTTGGTTCCCAAAATACTAGAGTATTAGATTGGACAGAGCGTAGCAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGCCTAAAAATCATACACCGAGATCTCAAACCTAGCAATATTTTGTTAGATGACGAAATGAATCCGAAAATTTCCGATTTTGGTTTGGCAAGGATGGTTGCTATTAGTGAAAATGAGGGAAGTACAAATCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCTATGTTCGGACAATATTCTGAAAAGTCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATAAGTGGAACGAAGAATACAGGTTGTCATGATTCACAATACGCTGATGGCCTCTTAAGCTATACTTGGAAGCGATGGAGGGATGACAAATTGGTAGAGATATTAGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATAAAGTGCATTCAGATTGGTTTGTTATGTGTTCAAGAGAATCCAAATACAAGGCCTTCCATGGCTACGGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTACCACAGGAACCTGCTTTCTTCTTGCATGGTCATCAACCAGCGCCTATTATCACCAATACAAGCCAAGAATCATGCTCTGCTAATGAAGCTTCCATGACTGAATTCTTTCCTCGCTAA 2022 0.4273 MKCFLLFFFLIITFLCSSTIIEARPTYLYHNCSTASKTFSSNSTFRSHRTTLLSSLASANAGFSNTTVPGGGSDTIYGLFMCRGDVSLPVCRQCVVNATQRLPSECPFSKEAVIWYDECMLRYSDTSFFSTINKWPTVVMLNPNNISDSNQARFNSFLRSFMNETASKVAAKSAALSTEEGTAYVKNQADFENKTLYSLAQCTPDLPIEDCRSCLSGVIGNMPSCSEGKIGGRAVNPSCNVRYELFSFYDSNEQLGPTLSPAPALTPTGRPNPFFPRTNSSNHPPPRPPAKTIVIVVASLLVGGIIFYLAYCLLKIRIKKSHRANLRQKYFGRESTTLEHLQFNLATIESATNKFSHDNSLGRGGFGQVYKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKLLVYEYVPNRSLDYFLFGSQNTRVLDWTERSKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLARMVAISENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGTKNTGCHDSQYADGLLSYTWKRWRDDKLVEILDSNINELGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLSNDSIQLPLPQEPAFFLHGHQPAPIITNTSQESCSANEASMTEFFPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0466 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 669 - -
Lele34g0466 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 25 127 - -
Lele34g0466 673 FunFam Cysteine-rich receptor-like protein kinase 10 317 430 - -
Lele34g0466 673 MobiDBLite consensus disorder prediction 265 286 - -
Lele34g0466 673 ProSiteProfiles Gnk2-homologous domain profile. 134 248 IPR002902 -
Lele34g0466 673 FunFam Cysteine-rich receptor-like protein kinase 10 136 248 - -
Lele34g0466 673 SMART serkin_6 355 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0466 673 Pfam Protein kinase domain 357 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0466 673 FunFam cysteine-rich receptor-like protein kinase 10 431 633 - -
Lele34g0466 673 Pfam Salt stress response/antifungal 32 125 IPR002902 -
Lele34g0466 673 Pfam Salt stress response/antifungal 149 244 IPR002902 -
Lele34g0466 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Lele34g0466 673 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
Lele34g0466 673 CDD STKc_IRAK 361 626 - -
Lele34g0466 673 Gene3D - 137 248 IPR038408 -
Lele34g0466 673 Gene3D - 24 128 IPR038408 -
Lele34g0466 673 ProSiteProfiles Protein kinase domain profile. 355 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0466 673 ProSiteProfiles Gnk2-homologous domain profile. 27 128 IPR002902 -
Lele34g0466 673 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Lele34g0466 673 SUPERFAMILY Protein kinase-like (PK-like) 338 652 IPR011009 -
Lele34g0466 673 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0466 Lele-ChrLele34 4799939 4804238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0466 4 673 Receptor kinase-like Gene Family AT4G05200 43.314 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g0466 Pkinase 3.3e-48 CL0016