Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0446 ATGATGAAGCCACTTGAAGCCAACAGTACAAAAGTGCCTCACAAAAAGGGAGCTTGGACACCACAAGAAGATTCCGAACTTGCTGAAGCCATCGCAGTTAATGGTGCAAAAAGGTGGAACTCCATAGCCGCTAGAGCAGGTCTGAATAGGAATGGTAAGAGTTGCAGGCTAAGATGGTTGAACTATCTGAGACCTAATATCAAGAGGGGAATATATCAGACCAAGAAGAGGATTTGA 237 0.443 MMKPLEANSTKVPHKKGAWTPQEDSELAEAIAVNGAKRWNSIAARAGLNRNGKSCRLRWLNYLRPNIKRGIYQTKKRI 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0446 78 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele34g0446 78 PANTHER MYB DOMAIN PROTEIN 55 9 70 - -
Lele34g0446 78 SUPERFAMILY Homeodomain-like 11 70 IPR009057 -
Lele34g0446 78 SMART sant 15 65 IPR001005 -
Lele34g0446 78 MobiDBLite consensus disorder prediction 1 23 - -
Lele34g0446 78 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele34g0446 78 CDD SANT 18 63 IPR001005 -
Lele34g0446 78 Gene3D - 15 69 - -
Lele34g0446 78 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Lele34g0446 78 FunFam Myb transcription factor 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0446 Lele-ChrLele34 4542406 4542964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0446 15 70 MYB Transcription Factor Family AT1G48000 60.714 6.89e-21 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele34g0446 Myb_DNA-binding 1.3e-16 CL0123