Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0441 ATGGAGATTTCACCCATCATCAGAGAGTTACCTGATCAACTGGGAATAACAATGGAGGATCCTGGTTATCTTCATAAGTGGCATGATCATCATCACTTGAACGCTTATGAGGATCCAACCTTAATACCCATTGCTGCAGCTTTTGGAGAGACCTTATTCTGTAATAATATGATGAACCCATCAAACTTCAATAATCCCAAAATCAGTAGTTGCATGCAAACTTGTTCCATTAATGAAGAAAGACCCACAAAGCAGATCAAAACCAGCAACAACACTACTTCTTCTTCCTGTTGGAGTCCCAGTAATAATAATACTCATGAGAGTCCAGATCATTATCACCAGACATCATCAGACCAGGTTCTGCAATTTGCTTCTTCTTGTCCAAATCTTCTTTCCTTTGTGAACCAGAACTACATAAATCAGATGGGGTTAATGGGGAAGACGACCAATAATAATAAGGATGAGACAGTATTATTGTCTCCAAAAGTCAATGAGACAGTTTTGATGTCTTCTCAAGAATCCTTGGGGAATCCGAACTATGGGTTCATGAAGAAGACGACAAGCCAAGATCAGGCGAGGAAGATTGCAGGGACCATTAGTCCTAATAGTAATAGAGTTTCTCAACCAGTACAGGATCACATCATTGCTGAAAGGAAACGAAGAGAGAAGCTTAGCCAAAGGTTCATTGCTTTGTCTGCCCTTGTTCCTGGTCTTAAGAAGATGGACAAAGCTTCTGTGCTTGGAGATGCTATAAAGTACATGAAGCAACTGCAAGAGAAAGTAAGGGTTCTTGAGGAGGACCAGAAAAAGGCGAAAACCGTAGAATCTGTAGTAATTGTGAGAAAAACTCAGTTTCTTCCTTCTGATTCAGCACAAGCTTCAGACTCTTCTTCAGATTCCGGTGGAGGAGGAGGATCATCGTCCTTCGACGAGACAGTTCTCCCAGAAATTGAAGCAAGGTTCTGTGAAAGAACTGTGCTCATAAGAATTCACGGTGAGAAAATCAAAGGATTTCTTGAAAAAGCAATGAGTGTGATTGAGGATCTCCATTTAACAGTCACCAATAGTAGTTCCTTGACTTTTGGGAATGCTGCTCTTGATATCACAATTATTGCTCAGGTATGA 1125 0.4062 MEISPIIRELPDQLGITMEDPGYLHKWHDHHHLNAYEDPTLIPIAAAFGETLFCNNMMNPSNFNNPKISSCMQTCSINEERPTKQIKTSNNTTSSSCWSPSNNNTHESPDHYHQTSSDQVLQFASSCPNLLSFVNQNYINQMGLMGKTTNNNKDETVLLSPKVNETVLMSSQESLGNPNYGFMKKTTSQDQARKIAGTISPNSNRVSQPVQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYMKQLQEKVRVLEEDQKKAKTVESVVIVRKTQFLPSDSAQASDSSSDSGGGGGSSSFDETVLPEIEARFCERTVLIRIHGEKIKGFLEKAMSVIEDLHLTVTNSSSLTFGNAALDITIIAQV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0441 374 Pfam Helix-loop-helix DNA-binding domain 212 258 IPR011598 GO:0046983
Lele34g0441 374 MobiDBLite consensus disorder prediction 82 117 - -
Lele34g0441 374 MobiDBLite consensus disorder prediction 289 307 - -
Lele34g0441 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 269 IPR036638 GO:0046983
Lele34g0441 374 Gene3D - 207 278 IPR036638 GO:0046983
Lele34g0441 374 PANTHER BHLH TRANSCRIPTION FACTOR 59 374 - -
Lele34g0441 374 MobiDBLite consensus disorder prediction 289 309 - -
Lele34g0441 374 Coils Coil 247 274 - -
Lele34g0441 374 SMART finulus 214 263 IPR011598 GO:0046983
Lele34g0441 374 CDD bHLH_AtNAI1_like 211 282 - -
Lele34g0441 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 208 257 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0441 Lele-ChrLele34 4495919 4499251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0441 179 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 51.485 4.70e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele34g0441 HLH 3.2e-10 No_clan