Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0410 ATGTTGACATCACACTCCAACTTTATAAAAAGGCATATTTTGCAGTTGAATTTTAACTCTGGAAAGGCCATCCAAGAAGAAGAAAAGAAAATGGGGGAAACTGCACAAGAGAATGGAGTGGTCGACGCAGACATGGCTAATATCATTGTTCCCTATCTCGACGGTATATCTCACAAAAGAGATCATTTCTTAGGTTATCCAACGAATCAAGACTTCAACTACGATGCATTGGTGCCGTTACTACATTTCCACTTGAACAATGCTGGTGATCCATTTATTGGCAGCAGTTTTTCGCTTAATTCAAATTCATTTGAGCTGTGCGTACTTGATTGGTTTGCCAAACTATGGCAAATAGAGAAGAATGAGTACTGGGGATATGTTACCAGCGGTGGAACTGAAGGAAATCTCCAAGGGATTTTAGTTGGGAGGGAACTATATCCCGATGGAATTGTTTACACATCACGGGACTCACATTATTCAGTGTTGAAAGCAGCAAGACTTCTTCGAGTCAAGTGTGTGGTAGTTGGGACTTCAATCTCAGGTGAGATTGACTACAACGAACTAAAGGAGTCACTTATTGCAAACAAGGACAAGCCTGCCATAATCAACCTAAACATAGGGACCACATTAAAGGGAGCCATTGATGACCTTGATATTGTACTACAATCACTTGAGGATTGTGGTTTCACTCAAGATAGATTCTACATTCATTGTGATGCCGCACTATTTGGAGTGATGCTACCTTTTGATGTTGGAGCACCTGAAATTTCTTTCAAGAAACCTATTGGAAGCATAACTATTTCAGGCCACAAGTTCCTCGGCTGTCCAATTCCTTGTGGCATTATTATAACTCGTTCAAAATACATTGATTTTATCTCAAGGGAAGTAGAATACATTGCTTCAAAAGACACCACCATCTCAGGAAGTAGAGCAGGCCATGCTCCCATCTTCATTTGGTATGCTCTCAACAAGAAAGGCTCCAATGGCCTTCAACAAGAAGTTCAAGACTGCATCAAGAAGGCGGTCCATCTTCGAGATCACTTGAGACGCCATGGAATCGGAGCCCTTCTAAACAAGTTTAGCAACACCGTGGTGTTTGAGAGACCTCAAGATGATGAATTTGCTCGTAAGTGGAGCTTGGCTAACAAAGGGAATATATCACACGTCGTGGTGATGCAACATGTGTCTCTGGAAATGTTAGACTCATTTGTGAGTGAATTTGTGAAGAATCGGTCAGCTTGGTTCCAAGACAATAATAGGCAAATGGCGCCTCCTTGCGTTGCTGAGGATATTGGTGCTGAGAATTGTGCTTGTGCTGTTCACAAAATGTTGATTCCATGA 1341 0.4169 MLTSHSNFIKRHILQLNFNSGKAIQEEEKKMGETAQENGVVDADMANIIVPYLDGISHKRDHFLGYPTNQDFNYDALVPLLHFHLNNAGDPFIGSSFSLNSNSFELCVLDWFAKLWQIEKNEYWGYVTSGGTEGNLQGILVGRELYPDGIVYTSRDSHYSVLKAARLLRVKCVVVGTSISGEIDYNELKESLIANKDKPAIINLNIGTTLKGAIDDLDIVLQSLEDCGFTQDRFYIHCDAALFGVMLPFDVGAPEISFKKPIGSITISGHKFLGCPIPCGIIITRSKYIDFISREVEYIASKDTTISGSRAGHAPIFIWYALNKKGSNGLQQEVQDCIKKAVHLRDHLRRHGIGALLNKFSNTVVFERPQDDEFARKWSLANKGNISHVVVMQHVSLEMLDSFVSEFVKNRSAWFQDNNRQMAPPCVAEDIGAENCACAVHKMLIP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0410 446 PANTHER - 34 442 - -
Lele34g0410 446 SUPERFAMILY PLP-dependent transferases 54 409 IPR015424 -
Lele34g0410 446 Pfam Pyridoxal-dependent decarboxylase conserved domain 98 353 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele34g0410 446 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 264 285 IPR021115 GO:0016831
Lele34g0410 446 Gene3D Aspartate Aminotransferase, domain 1 312 411 IPR015422 GO:0003824
Lele34g0410 446 Gene3D - 96 311 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0410 Lele-ChrLele34 3819968 3822608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0410 206 350 Calmodulin-binding Proteins AT1G65960 25.325 6.04e-07 49.3