Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0408 ATGGAGATGGTCGTTCACGACGTGAGGTCAATGGAGAGGTTGTTCTTCGATCCGAACGTCACAAGCTATACTCCTTTGCTATATATGGGGATATCTCCACTCAAGAGTAAAACTCTTCCGCTTCCTTGTTTGCTCATAAACAAAATTTTCATATTGTATCTCATAATCCCAGCTGGTGCGACCTCAGTATCCTTCAACTATGAGAAATTTCTTGATTTGGATCATCAGAACTTGAACACTGAAGGAGATGTTTTCCAGGAAAATGGAATGCTCAACCTCACCAGATACGGGAAAGACAGTTCAGGGAGAGTAACATACAAGAACTTGTTTCAACTTTGGGACAACGACACAAGAACACTTGCAAACTTCACTACTCGTTTCACCTTCATCATCAATGATCTAAATAGATCTAATGGGATGGGAGATGGCATCACATTCTTCTTGGCACACCCTGATTTTCCACTTCCAGTGCCCCCAGATGGCACTGGCATTGGTCTTGTGGGTCGTAGGGAGATGGGGGATCCAAATTACCCCAACGACCATCCGTTCGTAGCAGTCGAGTTTGACACGTTTCCCAATGTCGATGAGGGTGATCCCCCTTATGATCATGTGGGAATCGATGTGAAAACAATGTGGACTCCTTTCACAACACAGTGGTACACTATGAATGATAGTAGAAAATATGATGCTGAGATTAGCTACAATTCTAGCTCACACCAGTTAACTGTCAATTTTACTGGGTTTAAGGATAATATCTCAATTCAACAAGACTATTCCCATGAAATTGACTTGAGAGAATACCTACCAGAACAAGTTCAGTTTGGTTTCTCTTCAGCCACAGGACTTCGCTGGGAGATACATACACTATGCTCATGGTCCTTCAATTCAAGTGCTGCAATTCTGGGAGTAGTGAAGAACAAGGGTCATAAAAGCAATAATAATAATAAGGGTTTGATCATTGGATCGACCATTGGATCAGTTGCAGTGATTGTGGGGTTATGCATGGCTTGGTTTCTGATATGGAAGTTAAATTGTAGGGCAATGAAAAGAGATGATGATTTGGATCTTTCATTGGACAAAGATTTTGAAAGTGTGGGACCAAAGAAGTTTTCCTATAATGAACTTGTCAGAGCCACAAACAACTTTGCAGAGGATCACAAACTTGGAGAAGGAGGTTTTGGTGGTGTCTACAAAGGATTCATGAGAGGCTTAAATACTTATGTTGCAATTAAGAAGGTGTCCCAAGAATCTAAACAGGGAGTAAGGGAATATTCCTCTGAAGTAAAGATCATCAGTCAACTAAGGCACAAGAATTTGGTGCAACTCATGGGTTGGTGTCACGAGAAAAATGATCTTCTACTCATCTACGAGTTCATGCCAAACAGAAGCTTAGATTATCATTTGTTTCAAAGAGAAAACCTCTTGACATGGCCTACTAGATATAATATCGCTCGAGGACTAGCCTCAGCAATGCTCTACTTGCACGAAGAGTGGGAGCAATGCGTAGTTCACAGAGACATAAAATCGAGCAACATCATGTTGGATTCAAATTTTAATACAAAGCTCGGAGATTTCGGGTTAGCAAGGCTCGTGGAACATGGGAAAGGGTTAACAACAACAACTGCAGCAGGAACAAAAGGATACATGGCTCCTGAATGCTTGGCAAGGGGCAAGGCAACAAGAGAATCTGACATGTATAGTTTTGGAGTCGTTGCTTTAGAAATAGCTTGTGGGCGAAAACCAATCGACCCTAATGTTAGTGATGAACAAGTCATGATGGTAGAATGGGTATGGGAACTCTATGGCAAAGGTGAGCTTCTTGAAGCAGTTGACAAAAAACTTGAAAATGGAGATTTTGACGAGCAAGAACTCGAAAGGTTAATGATTCTTGGGCTTTGGTGTGCTCACCCAGATTACACTATGAGGCCTACAATTAGACAAGCAGTTCATGTGCTTAACCATGAAGCTCCATTGCCTAGTCTCCCACCAACAATGCCCAAACCAGTGTATGTTGCTCCAACTTTTTCCGATATTGGTTCTTCAAACTTTTCATCTGCTTATGCTAGTTCTTCAGCAACCAATAAAACTAGGCCCTCACCAAGTAATAGGTCACACACTGGATCCTCACAAGCATCCATATCAAGCACACATCAAGGAAGGAAAAAAGCCAAGGAAGTTTCTCTTGAGTAA 2190 0.4169 MEMVVHDVRSMERLFFDPNVTSYTPLLYMGISPLKSKTLPLPCLLINKIFILYLIIPAGATSVSFNYEKFLDLDHQNLNTEGDVFQENGMLNLTRYGKDSSGRVTYKNLFQLWDNDTRTLANFTTRFTFIINDLNRSNGMGDGITFFLAHPDFPLPVPPDGTGIGLVGRREMGDPNYPNDHPFVAVEFDTFPNVDEGDPPYDHVGIDVKTMWTPFTTQWYTMNDSRKYDAEISYNSSSHQLTVNFTGFKDNISIQQDYSHEIDLREYLPEQVQFGFSSATGLRWEIHTLCSWSFNSSAAILGVVKNKGHKSNNNNKGLIIGSTIGSVAVIVGLCMAWFLIWKLNCRAMKRDDDLDLSLDKDFESVGPKKFSYNELVRATNNFAEDHKLGEGGFGGVYKGFMRGLNTYVAIKKVSQESKQGVREYSSEVKIISQLRHKNLVQLMGWCHEKNDLLLIYEFMPNRSLDYHLFQRENLLTWPTRYNIARGLASAMLYLHEEWEQCVVHRDIKSSNIMLDSNFNTKLGDFGLARLVEHGKGLTTTTAAGTKGYMAPECLARGKATRESDMYSFGVVALEIACGRKPIDPNVSDEQVMMVEWVWELYGKGELLEAVDKKLENGDFDEQELERLMILGLWCAHPDYTMRPTIRQAVHVLNHEAPLPSLPPTMPKPVYVAPTFSDIGSSNFSSAYASSSATNKTRPSPSNRSHTGSSQASISSTHQGRKKAKEVSLE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0408 729 SUPERFAMILY Protein kinase-like (PK-like) 366 676 IPR011009 -
Lele34g0408 729 Pfam Protein kinase domain 383 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0408 729 ProSitePatterns Protein kinases ATP-binding region signature. 388 412 IPR017441 GO:0005524
Lele34g0408 729 FunFam Lectin-domain containing receptor kinase A4.3 459 672 - -
Lele34g0408 729 Gene3D - 60 305 - -
Lele34g0408 729 MobiDBLite consensus disorder prediction 685 717 - -
Lele34g0408 729 Pfam Legume lectin domain 63 298 IPR001220 GO:0030246
Lele34g0408 729 PANTHER - 86 673 - -
Lele34g0408 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Lele34g0408 729 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 298 IPR013320 -
Lele34g0408 729 MobiDBLite consensus disorder prediction 685 729 - -
Lele34g0408 729 ProSitePatterns Legume lectins beta-chain signature. 184 190 IPR019825 -
Lele34g0408 729 FunFam L-type lectin-domain containing receptor kinase IX.1 367 458 - -
Lele34g0408 729 Gene3D Phosphorylase Kinase; domain 1 367 458 - -
Lele34g0408 729 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0408 729 SMART serkin_6 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0408 729 CDD lectin_legume_LecRK_Arcelin_ConA 63 297 IPR001220 GO:0030246
Lele34g0408 729 Gene3D Transferase(Phosphotransferase) domain 1 459 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0408 Lele-ChrLele34 3768551 3775664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0408 49 670 Receptor kinase-like Gene Family AT5G10530 45.728 1.67e-173 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele34g0408 Pkinase 7.4e-53 CL0016