Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0401 ATGCTTTATGTCAACCGTTTACTAAGACCATTCAAAATTGGCGTCTGTGTTGGAGATGATGGAAATAACCTAATTCTGGGAGAGCCGACCAATTTCATTTCAGCAATGGGATTCTTTTGCAGAGATACAATCCTAGTCGCTGTTTCGCTCATATTTGGCTTCTCCTGTTTTCACTATTGCAGTGCCAAAGACACCATCAAATCATCACAATACGTTTCGGATCCAGAAACTGTTAGTTCCAATGGAGGCTCCTTCATATTGGGATTTTTCAGTCCAGAAAATACTACAAATCGCTACATGGGAATTTGGTACAAATCCCAATCCAATATCATATGGGTAGCTAACAGAAACCACCCGTTGACGGATTCTTCTGTGACTGGGACTATTACAATTTCTGCAGATGGCAATCTTGTGTTATTAAATGGGACAAACCACACTATTTGGTCATCAAATGTGTCAAATATTGCCCTCAATAATGCAACTTGTCAGCTTCAAGATTCTGGAAATCTTGTCCTCACTACAGATTCTGCAGAAAAGAACATCTTATGGCAAAGTTTTGCGAATCCTTCTGACTCATTCATCCCCCAAATGAAACTTACAAGCAACAAAAGAACAGGTGAGAAACTAGGATTAACATCATGGAAAAGTTTGTCAGATCCATCCGTGGGTAACTTCTTTATGACCCTTGAACGCCTAGATATTCCTGAAGTATTCATCTGGAATGGAGCTCGCCCATATTGGCGAAGTGGTCCATGGAATGGTAGCACATTTACTGGAATATACTTTATGAGTAACCTTTATCTTAAAGGGTTTCATATCATAGATGATGGAGGAGGAACTATTTCTTTGTCTTTCAGTTTTTCTGATGTGTCAGAATTCACTATATTTTCCTTAGACTTTCGAGGCCTATTATATGAAAAAGATTGGTATAATGACACGATACAGCCACAATTTAATTATAGTATTCAAATTTCAGAATGTGATATTTATGGTTTATGTGGATCATTTGGAAGCTGCAACCCAATTAGTTCACCTATATGCAACTGTTTGAGAGGTTTTGAACCAAGCAATAGAAAGGAATGGGATATGCAAATCTGGACTAATGGTTGTGTTAGGAAGACAACTTTGCAGTGTGATAAGTTGAAAAATGGACGTGCACAAGGTGGCGAAGAAGATGGATTTTTGAAGTTGGAGATGGTTAAAGTGCCAGATTTTGCAGAATGGTCTTTGGCTTCAGAGGACACCTGCAGAAACCAGTGCTTGGAGAATTGTACTTGTGTAGCTTATTCATATAGTCCTGAAATAGGTTGCATGTCTTGGAAGGGAAATCTAACTGATATACAACAGTTCCCAACAGATGGACTAGATCTATACGTTCGTATAGCCTATTCAGATCTTGAAAAGAATAATAGACATGCAAGAAAGATCATTATCATTACAACAGTAATAATAGGAACACTTATCATTGCTTTGGGTACATATGTTTTATGGAAAAGGATAACGAAACATTCAGAGACAAAATTGAAGAACAGATGTTTCTTACGATTAAAGAAACGTGAAGACGATTCAGAGAAAACAGAAGACACAATTATTGGAGAATTGTCACATGTCACATTACCAGAGGTATTGACATATGATCTTGAAAAGGTTGCGACTGCTACAAACAATTTTGACATCTCCAATAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTACAAGGGGATATTGCAAGATGGCCAGAATATAGCAGTTAAAAGACTTTCTAGAACATCTGGACAAGGACTAGAGGAATTCATGAACGAGGTCATTGTCATTTCTAAGCTTCAACACCGTAATCTTGTAAAACTTATTGGCTGCTGCATTGAAAGAGGAGAGAAGATGTTAATCTACGAGTACATGCCGAATAAAAGTTTAGATGCATTTATTTTTGATCCACCAAACCGTAAACTCCTAGATTGGAGAAAGCGCTTTGACATAATTGAAGGAGTGGCTCGAGGAATGCTTTATCTTCATCGAGATTCAAGACTAAAAATTATACATAGAGATCTAAAGGCAAGTAACATATTGCTAGATGAGAACTTGAATCCCAAAATTTCAGATTTTGGCATGGCAAGAATTTTCCAAGGGAATACTGAAGATCAAGCTAACACAAGAAGAGTTGTTGGAACCTATGGTTATATGTCGCCAGAGTATGCAATAGAAGGATTATTTTCAGAGAAATCCGATGTGTTTAGTTTTGGAGTTTTACTATTAGAGATTGCTAGTGGAAGAAGAAACTCAAGCGTTTTTAACTATGAGGCTTCTCTCAGCCTTCTAGGATTTACATGGAAATTATGGAATGAGAAGAATGCTGCAACGGTAATAGATCCTAGAATATATGATACCAACGTGGAGAAAGATATAGTAAGATGCATACACATAGGAATGTTATGCGTGCAAGAACTTGCAAGAGAGAGGCCAAGTATGAGCACTGTGGTTTCCATGCTTAGCTGTGAGATTGTAGATCTTCCTCCTCCAAAACAACCTGCATTCATCCAATGGCAGAGTTTGGGTTTGTTGTGTTCATCAGCATCTAATGAAGAAAGTCAAAGATCGTTTTCAAACAATGGTGTTAGCATTACACAGATGTATGGCAGATGA 2640 0.3795 MLYVNRLLRPFKIGVCVGDDGNNLILGEPTNFISAMGFFCRDTILVAVSLIFGFSCFHYCSAKDTIKSSQYVSDPETVSSNGGSFILGFFSPENTTNRYMGIWYKSQSNIIWVANRNHPLTDSSVTGTITISADGNLVLLNGTNHTIWSSNVSNIALNNATCQLQDSGNLVLTTDSAEKNILWQSFANPSDSFIPQMKLTSNKRTGEKLGLTSWKSLSDPSVGNFFMTLERLDIPEVFIWNGARPYWRSGPWNGSTFTGIYFMSNLYLKGFHIIDDGGGTISLSFSFSDVSEFTIFSLDFRGLLYEKDWYNDTIQPQFNYSIQISECDIYGLCGSFGSCNPISSPICNCLRGFEPSNRKEWDMQIWTNGCVRKTTLQCDKLKNGRAQGGEEDGFLKLEMVKVPDFAEWSLASEDTCRNQCLENCTCVAYSYSPEIGCMSWKGNLTDIQQFPTDGLDLYVRIAYSDLEKNNRHARKIIIITTVIIGTLIIALGTYVLWKRITKHSETKLKNRCFLRLKKREDDSEKTEDTIIGELSHVTLPEVLTYDLEKVATATNNFDISNKLGQGGFGPVYKGILQDGQNIAVKRLSRTSGQGLEEFMNEVIVISKLQHRNLVKLIGCCIERGEKMLIYEYMPNKSLDAFIFDPPNRKLLDWRKRFDIIEGVARGMLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGMARIFQGNTEDQANTRRVVGTYGYMSPEYAIEGLFSEKSDVFSFGVLLLEIASGRRNSSVFNYEASLSLLGFTWKLWNEKNAATVIDPRIYDTNVEKDIVRCIHIGMLCVQELARERPSMSTVVSMLSCEIVDLPPPKQPAFIQWQSLGLLCSSASNEESQRSFSNNGVSITQMYGR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0401 879 Pfam Protein tyrosine and serine/threonine kinase 559 829 IPR001245 GO:0004672|GO:0006468
Lele34g0401 879 Gene3D - 58 187 IPR036426 -
Lele34g0401 879 SMART ntp_6 389 461 IPR003609 -
Lele34g0401 879 Gene3D Phosphorylase Kinase; domain 1 516 632 - -
Lele34g0401 879 Pfam S-locus glycoprotein domain 247 356 IPR000858 GO:0048544
Lele34g0401 879 PIRSF SRK 36 879 IPR024171 GO:0004674
Lele34g0401 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 521 632 - -
Lele34g0401 879 ProSiteProfiles Protein kinase domain profile. 557 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0401 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 633 837 - -
Lele34g0401 879 SUPERFAMILY alpha-D-mannose-specific plant lectins 100 254 IPR036426 -
Lele34g0401 879 SMART serkin_6 557 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0401 879 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 49 820 - -
Lele34g0401 879 CDD PAN_AP_plant 374 462 - -
Lele34g0401 879 ProSiteProfiles Bulb-type lectin domain profile. 63 185 IPR001480 -
Lele34g0401 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 59 186 - -
Lele34g0401 879 Pfam PAN-like domain 390 447 IPR003609 -
Lele34g0401 879 SMART blect_4 69 189 IPR001480 -
Lele34g0401 879 SUPERFAMILY Protein kinase-like (PK-like) 539 829 IPR011009 -
Lele34g0401 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Lele34g0401 879 CDD STKc_IRAK 563 829 - -
Lele34g0401 879 Pfam D-mannose binding lectin 110 215 IPR001480 -
Lele34g0401 879 CDD B_lectin 69 189 IPR001480 -
Lele34g0401 879 ProSiteProfiles PAN/Apple domain profile. 378 462 IPR003609 -
Lele34g0401 879 Gene3D Transferase(Phosphotransferase) domain 1 633 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0401 Lele-ChrLele34 3721745 3725028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0401 512 845 Receptor kinase-like Gene Family AT3G45860 53.571 3.43e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g0401 PK_Tyr_Ser-Thr 5.7e-49 CL0016