Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0387 ATGCTAAACATGAGAAAACCTTCTTCCTTTGTTTTCATCTTCTTACTTCATTGCTTGATGATGACCTCTTTAGCTTGGAGTGAGGAGAATGATATCACTAACGACAAATATTCACTTCTTGCTTTTAAATCTTTCGTATCTTCAGATCCATACAATTTCTTAGCAAACTGGTCACTGTCTTCCTCTCCATGTAATTGGGTTGGTGTTGCCTGCAATGCTCGTCACGGAAGAGTTCATTCCTTGCATCTTAGTGGTATGGAACTTATTGGTATCATATCTCCACAGCTAGGAAATCTCTCGTTCCTTGTTGAACTTGATCTTAGTGACAACAATTTTTATGGTCAAATACCGAAAGAATTGGTTCGATTACATAGATTGAAGCTGTTTAACTTGAGTTACAATGATTTTGATCGACAAATTCCAACATCGATAGGAGCTTTATCCTCACTTGAGCACTTGGATTTTTGCAATAACAGTTTTAATGGATTTATTCCGTCATCTCTATCTAATCTATCAAGGTTGGAGACTTTGGATTGGAATTTTAATTTCATTGAAGGGACTATTCCACCTGAGATCGGAAGTTTAAAGCACCTGAAGATTTTACGACTCTCAAAGAACAAGCTTTCTGGAGCAATTCCCCAAACAATTTTTAACTTATCTTCACTTGAAAGATTGAGTTTGTCGTATAACACTTTATCAGGAGGCCTTCCAAGGGAGATTGCTAATCTTCCACAGCTACAAATCATATATCTTTCAAATAATCGACTTTCTAGCTCTATACCGGCTTCTATATTTAATAGTTCAGTGTTACAATACATTGAACTTAACAATAATAGCTTCTCTGGGAATCTCCCAGAAAATGTATGCTTTGGGCTTCCAAAACTTAGAAGACTTTATGTAAGTGGAAATGATTTGTTTGGTCAAATACCTTTTATTTGGCATCAATGCAAAGAATTATCAGAGTTAGATCTAAGCAATAACAGATTCAAGGAAGGAATCATTCCAAGTGACCTTGGAAATTTGACCAACCTCCAATACTTATATCTCAGCAATAACAGCTTGCAAGGTGAAATTCCGTTGTCTCTTTTCAATATTTCTTCATTGAGAGAAATAAGTCTTAGTCGAAACAGTCTACAAGGTAATATCCCAATATCATCAATTGGCAATTGGGCGTTACTCGAAATATTAGATCTAAGTTACAATTCGTTTACAGGGGAAATTCCATCATCTCTCTTCAACATTTCTTCTTTAATAGTAGTGTATCTAACAAGCAACAATTTAAAAGGTAGATTACCATCATCAATAGGCAATTGCACGTCGCTGGAATATTTATATCTAGAAGAAAACTCCTTAACAGGAGAAATTCCATCATCTCTTTTCAACATTTCTTCTTTGAGAGAAGTATATTTAAAAAGAAACAGTTTAAATGGTAATCTACCAATGTCAATTGGCAACCAGACAATGCTGGAAAGTTTATTTCTAGATGACAACTCCTTTACAGAGGGAAATGTTCCAAAATCAATAAGTAACTGTACATCTTTGCTAGCCTTCTTTCTGGGTATAAACTCATTTTCAGGTTTTGTACCCAATGAGATAGGCAATCTTGATAAGCTTGAAGAGTTGGATTTATCAGATAATAATTTCAATGGATTCTTTCCTTTCCATATATTCAACATTTCAGCATTGACATGGGTATCCCTCGCATATAATTCATTCTCTAGCTTTCTCCCATCAAATTTAGGAATTGGCCTTCCCAACATGAAGGAATTGAGGTTGGGACGGAATCAACTTATTGGACAAATTCCAAACAGCATCTCAAATGCTTCTGAGCTCACTGTGTTAGATTTATCAGGGAATAAATTTAGTGGTACTATACCCAATGTACTTGGGAATCTAACAAATTTGATGGCATTATATTTAGATGGGAATGAATTGAATGGGTTGATTCCGAAAACAATTAACAAACTGCAAAGCCTTCAACATTTAAGTCTTAGCAATAACAAATTGCAAGGGCCCATCATAAATGAATTGTGCCAAATCAAAAGTTTGAGTGAGTTGTATCTAGCCAAAAATATGTTTTCAAGAATGATTCCAAGCTGCCTCACAAATACTTCTTTGCGGAAGTTAGATTTAAGCTCTAACAAATTGATTTCTCATATACCCTCTTCTCTGTGGAGTCTTGAAGATATATTAGCCTTAGACTTATCCTCCAATGCATTGAGTGGAAGAATTCCTCGTGAGGTATCAAACTTGAGAGCAATTATACACTTGAACTTGTCAAGAAATCAAATTATAGGAAACATCCCTACAACTATGGGTGGTTTGAAAACTTTGTTAAACTTATCTTTGGCTCATAACAAATTACAAGGACCTATTCCTGAATCACTTGGTGGTATGATAAGCTTGGATTTCTTGGATCTCTCTCAAAATTACTTGTCAGGTGTGATTCCGAAGTCATTGGAGTCACTTGTCCATTTGAAATACATTAACCTTTCATATAATTTATTGCAAGGAGAAATTCCAAATGGTGGGTCTTTTGAAAATTTTACAGCTGATTCTTTTATGATGAATGAAGATCTTTGTGGGAAGCCCAAACTACTAGTCCGGCCATGTAGGAAAGGAAACAAGCATAACTCAAGTAAAGTTATGTTGTTGATAACATGCTCATTGCCTATCGTGGTTGTCATTTTAGTTATTGTTTCATGCGTACTCTTTCTAAAGCATAAGAGAGGTCATGTTAATGATTCAACTAATAAGGATTTAATGAATTTTGAGACACCAATGAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGAGTTTGATGAGAGTAATCTTCTTGGAAGGGGAAGTTCTGGATCAGTCTACAAAGCTGTTCTTTCAAATGGAAAAATTGTTGCAGTTAAAATATTTAACTCAAGCCTAGAAGGAGCATCAAGTAGTTTTGAAACTGAATGCGCTGCTTTGTACAGTTTACGTCATCGTAATCTCACTAAGATAATTAGTGATTGCTCAAATGGTGAATTTAAATCCATAATAATGGAATTCATGCCAAATGGGAGCCTTGACAAATGGTTATACTCTATTAACTACTATTTGGATATCTTGCAAAGGTTAGATATAATGATAGATGTAGCAGCTGCTTTGGAGTATCTTCATCACGGTTCTCCTACACCAATTGTTCATTGTGACATAAAACCAAATAACATATTGTTGGATGAAGATATGGTGGCTCACCTTAGTGATTTTGGTATTGCCAAATTGTTAGGTGAAAGACAGATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTATATGGCACCAGAGTATGGATCACAAGGAATTGTTTCTTTTAAGGGAGATGTATATAGTTATGGCATTTTGTTGATGGAAATGCTTACAAGAAAGAAGCCGACAGATGAGATGTTTGCTCAAGGTTTAACTTTGAAAGATTGGGTCAAAAAATCGACACCTCATTCTATAATTAATATTCTAGATGCCACTTTGTTGCCAGAAGAAGATCAAGATATTGGAAGCATATTGTCACATATATCCACACTTCTTGAGTTGGCTTTAGATTGTTGCATTGATTTACCTGGAGCACGAATTGATATGAAGGATGTGGTGGTAATACTCAACAAAATCAAGACCTCGTTTATGAAAAAATCTTGGAGACACCACTAA 3690 0.3523 MLNMRKPSSFVFIFLLHCLMMTSLAWSEENDITNDKYSLLAFKSFVSSDPYNFLANWSLSSSPCNWVGVACNARHGRVHSLHLSGMELIGIISPQLGNLSFLVELDLSDNNFYGQIPKELVRLHRLKLFNLSYNDFDRQIPTSIGALSSLEHLDFCNNSFNGFIPSSLSNLSRLETLDWNFNFIEGTIPPEIGSLKHLKILRLSKNKLSGAIPQTIFNLSSLERLSLSYNTLSGGLPREIANLPQLQIIYLSNNRLSSSIPASIFNSSVLQYIELNNNSFSGNLPENVCFGLPKLRRLYVSGNDLFGQIPFIWHQCKELSELDLSNNRFKEGIIPSDLGNLTNLQYLYLSNNSLQGEIPLSLFNISSLREISLSRNSLQGNIPISSIGNWALLEILDLSYNSFTGEIPSSLFNISSLIVVYLTSNNLKGRLPSSIGNCTSLEYLYLEENSLTGEIPSSLFNISSLREVYLKRNSLNGNLPMSIGNQTMLESLFLDDNSFTEGNVPKSISNCTSLLAFFLGINSFSGFVPNEIGNLDKLEELDLSDNNFNGFFPFHIFNISALTWVSLAYNSFSSFLPSNLGIGLPNMKELRLGRNQLIGQIPNSISNASELTVLDLSGNKFSGTIPNVLGNLTNLMALYLDGNELNGLIPKTINKLQSLQHLSLSNNKLQGPIINELCQIKSLSELYLAKNMFSRMIPSCLTNTSLRKLDLSSNKLISHIPSSLWSLEDILALDLSSNALSGRIPREVSNLRAIIHLNLSRNQIIGNIPTTMGGLKTLLNLSLAHNKLQGPIPESLGGMISLDFLDLSQNYLSGVIPKSLESLVHLKYINLSYNLLQGEIPNGGSFENFTADSFMMNEDLCGKPKLLVRPCRKGNKHNSSKVMLLITCSLPIVVVILVIVSCVLFLKHKRGHVNDSTNKDLMNFETPMRISYYELLRGTNEFDESNLLGRGSSGSVYKAVLSNGKIVAVKIFNSSLEGASSSFETECAALYSLRHRNLTKIISDCSNGEFKSIIMEFMPNGSLDKWLYSINYYLDILQRLDIMIDVAAALEYLHHGSPTPIVHCDIKPNNILLDEDMVAHLSDFGIAKLLGERQMEIYTKTLATIGYMAPEYGSQGIVSFKGDVYSYGILLMEMLTRKKPTDEMFAQGLTLKDWVKKSTPHSIINILDATLLPEEDQDIGSILSHISTLLELALDCCIDLPGARIDMKDVVVILNKIKTSFMKKSWRHH 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0387 1229 SMART LRR_typ_2 632 655 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 292 315 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 438 462 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 147 171 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 535 559 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 704 727 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 584 608 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 656 680 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 243 267 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 99 123 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 751 775 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 799 822 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 195 219 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 823 848 IPR003591 -
Lele34g0387 1229 SMART LRR_typ_2 341 365 IPR003591 -
Lele34g0387 1229 FunFam Piriformospora indica-insensitive protein 2 384 480 - -
Lele34g0387 1229 ProSiteProfiles Leucine-rich repeat profile. 705 727 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Protein kinase domain 943 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0387 1229 FunFam Piriformospora indica-insensitive protein 2 286 383 - -
Lele34g0387 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1061 1073 IPR008271 GO:0004672|GO:0006468
Lele34g0387 1229 SMART serkin_6 942 1222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0387 1229 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 875 - -
Lele34g0387 1229 SUPERFAMILY RNI-like 321 646 - -
Lele34g0387 1229 FunFam Inactive leucine-rich repeat receptor-like protein kinase 190 285 - -
Lele34g0387 1229 Gene3D Phosphorylase Kinase; domain 1 905 1017 - -
Lele34g0387 1229 Pfam Leucine rich repeat 633 692 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Leucine rich repeat 318 378 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Leucine rich repeat 393 451 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Leucine rich repeat 705 764 IPR001611 GO:0005515
Lele34g0387 1229 Pfam Leucine rich repeat 778 836 IPR001611 GO:0005515
Lele34g0387 1229 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 189 - -
Lele34g0387 1229 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515
Lele34g0387 1229 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1018 1227 - -
Lele34g0387 1229 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Lele34g0387 1229 Gene3D Ribonuclease Inhibitor 289 384 IPR032675 -
Lele34g0387 1229 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Lele34g0387 1229 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Lele34g0387 1229 SUPERFAMILY L domain-like 611 864 - -
Lele34g0387 1229 ProSitePatterns Protein kinases ATP-binding region signature. 948 970 IPR017441 GO:0005524
Lele34g0387 1229 Gene3D Ribonuclease Inhibitor 582 880 IPR032675 -
Lele34g0387 1229 Gene3D Ribonuclease Inhibitor 385 581 IPR032675 -
Lele34g0387 1229 SUPERFAMILY L domain-like 46 384 - -
Lele34g0387 1229 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 481 576 - -
Lele34g0387 1229 SMART LRR_sd22_2 147 173 - -
Lele34g0387 1229 SMART LRR_sd22_2 535 561 - -
Lele34g0387 1229 SMART LRR_sd22_2 438 464 - -
Lele34g0387 1229 SMART LRR_sd22_2 656 679 - -
Lele34g0387 1229 SMART LRR_sd22_2 195 221 - -
Lele34g0387 1229 SMART LRR_sd22_2 341 367 - -
Lele34g0387 1229 SMART LRR_sd22_2 703 719 - -
Lele34g0387 1229 SMART LRR_sd22_2 243 275 - -
Lele34g0387 1229 SMART LRR_sd22_2 823 851 - -
Lele34g0387 1229 ProSiteProfiles Protein kinase domain profile. 942 1222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0387 1229 Gene3D Transferase(Phosphotransferase) domain 1 1018 1227 - -
Lele34g0387 1229 SUPERFAMILY Protein kinase-like (PK-like) 921 1214 IPR011009 -
Lele34g0387 1229 PANTHER LEUCINE RICH REPEAT KINASE 2 556 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0387 Lele-ChrLele34 3482504 3487914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0387 38 1218 Receptor kinase-like Gene Family AT5G46330 34.406 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele34g0387 Pkinase 1.9e-43 CL0016