Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0379 ATGGTGCTTAGGGCATTTGGTGGCATGCTCACACATGCAAAAGTACTAAAACTTGCTAAGGATGAAATCTACCCGGGTTACCAATTTGTTCTTTTGCTTAGTACGTTTAGAAGAGGTTTATATTATGTGCAGCAGGTTATTGAAAGACATGATCAGCACTCAGAAATTGAAAGATTATATCATTCATCTGTTTTGCATGAAAAGGAAAGCTTCAGCATGCTCAGCAAGGAAGAAGCTCAAAAGACTCAGGAATTGAGGCAGTTGAAGGGAGAAGAGCTTGAAGGATTGAACATAAATGAATTACAGAAGCTTGAGGAACAATTAAAAAAAGGTTTGAGCCGTGTTGTCAAAGCAAAGGAAGAAATGTTCATGAAAGAGATCAATGTGCTCAAGAGAAAGAAAATCCAGCTGATGGAAGAAAATCAGAGATTGAAACAGGTGAAGAATGTTGCACAAGAACAAGGTTATTCATCTGAGTCAGCCAATACTGGCAGCACATCTGGTCCTTCGCATGACGACGATAGTTCAGGCACCTCTCTGAGATTGGGATTGTCTTTGTTTAATTAA 567 0.3915 MVLRAFGGMLTHAKVLKLAKDEIYPGYQFVLLLSTFRRGLYYVQQVIERHDQHSEIERLYHSSVLHEKESFSMLSKEEAQKTQELRQLKGEELEGLNINELQKLEEQLKKGLSRVVKAKEEMFMKEINVLKRKKIQLMEENQRLKQVKNVAQEQGYSSESANTGSTSGPSHDDDSSGTSLRLGLSLFN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0379 188 Coils Coil 127 154 - -
Lele34g0379 188 MobiDBLite consensus disorder prediction 148 188 - -
Lele34g0379 188 ProSiteProfiles K-box domain profile. 64 156 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele34g0379 188 Coils Coil 101 121 - -
Lele34g0379 188 Coils Coil 74 94 - -
Lele34g0379 188 Pfam K-box region 68 146 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0379 Lele-ChrLele34 3322048 3328023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0379 43 184 MADS-box Gene Family AT2G22540 40.000 1.23e-27 102