Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0347 ATGGGCCATAAGGACTCAAGAGTGAAGGTGAGACTGAAAGGATATGCGACTCAGGCGCGCTTTCGGAGGGGTCGACGCTCTTACTGGGAGAGTTTTGCGGCTGGAGCAAGTGGGGTTTACAACATGAAGTTCAACATTGCAAATCCCACCACTGGATGCCAGAAGAAGCTGGAGATCGATGACGATCAGAAGCTACGAGCTTTTTGGGACAAGCGTATCTCACAGGAGGTTAGCGGTGATGCTTTGGGTGAGGAATTCAAAGGCTATGTCTTCAAGATCACTGGTGGCTGTGATAAACAAGGTTTCCCAATGAAGCAAGGAGTGCTGACCCCTGGTCGTGTTCGTCTCTTGCTTCACAGAGGAACTCCTTGCTTCCGAGGATATGGAAGGCGTAATGGAGAACGCAGGAGAAAGTCTGTGCGTGGGTGCATTGTGAGTCCAGATCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAAAATGATTTGCCTGGACTCACCGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGCAAGCTGTTTAACCTTTCCAAGGAGGATGATGTTAGGAAGTATGTCAACACTTATCGCCGTTCCTTCACAACAAAATCTGGCAAAAAGGTGAGCAAGGCTCCCAAGATACAGAGATTGGTCACACCTTTGACCCTCCAAAGAAAGCGTGCAAGAATTGCACAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCAGAAGCAGCGGAGTACCAGAAACTTCTTGCCTCAAGGTTGAAGGAACAGAGGGAGCGTAGAAGCGAGAGTTTGGCCAAGAGGCGGTCCAAGCTCTCTACCGCTAAGCAATCCGTGGCAGCATAG 870 0.492 MGHKDSRVKVRLKGYATQARFRRGRRSYWESFAAGASGVYNMKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIAQKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSTAKQSVAA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0347 289 MobiDBLite consensus disorder prediction 260 289 - -
Lele34g0347 289 MobiDBLite consensus disorder prediction 260 278 - -
Lele34g0347 289 Gene3D - 174 275 - -
Lele34g0347 289 Coils Coil 230 257 - -
Lele34g0347 289 PIRSF RPS6e 42 289 IPR014401 GO:0003735|GO:0005840|GO:0006412
Lele34g0347 289 ProSitePatterns Ribosomal protein S6e signature. 93 104 IPR018282 GO:0003735|GO:0005840|GO:0006412
Lele34g0347 289 SMART Ribosomal_S6e_2 42 169 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele34g0347 289 Pfam Ribosomal protein S6e 42 169 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele34g0347 289 PANTHER 40S RIBOSOMAL PROTEIN S6 42 281 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0347 Lele-ChrLele34 2952553 2956939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0347 42 283 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.727 6.44e-119 337