Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0334 ATGGCGGAGCGAGCTTCTTATGGTGTGGGTCATCGATTAGATCTTCAGCAATTACAATATGAAGCCCAGCATCGATGGTTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAATTATCGGATGTTTCAGATTACTTCAGAACCTCCAAACAGGCCCACAAGTGGTTCACTTTTTCTGTTTGATCGGAAGGTCTTGAGATATTTCAGAAAGGATGCACATAATTGGAGGAAGAAAAAAGATGGAAAGACTGTGAGGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACATTGCTACTATGCCCATGGGGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGACATGATGCACATAGTTTTTGTTCACTACTTGGAAGTAAAGGGTAACAGAACAAATATTGTAGGAAATACAGATAGTGATGAGGTTACGTCCGGAAATAGCAGTTCTCCATCTCCATCATCTGGTTTTCCTATTAATTATGGTAATATGCCTTCAAGAAGCACAGATGCCATGAGCCCAGCTAGCACGTTAACTTCCTTATGTGAAGATGCTGATTCGGGTGATCATGGACAGTCATCAATTTCTGGAACAAATTATATCCCACTTGTTCAGGGAGAAAAAACTGGAGGAAGCAATGTATCCTTTGTTGAGGGCCAAAATGTACATGACATGGCCTCCTGGGACAGGGTCTTGGACCAATGTAGTGCTGGATTACATACTGATCCAAATCTTGCATCATTTGCTTCTGTCCCACCCTACTCAGTTGGGAACATTCTTGAACAAGAACCTGCTCTGGGTGATCTTTTAGCAAGTAAGGGTAACCTAGCTGAAGAGGCAGGGAAATCTCAGTCTTTTCAGTCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACCGTTGCATAAATGGCCAATAACCCAATTGTTGAGTTCTGAATATGTATCTGATTTTACCACTGGTATACTAGAGCATGAATCGCATACAGCAGGTCCTGAAATTGCTTCTGACGTGTTAACTGTTAATGGCCAGTTAAGAGAACAACCTTTGCAGGAAAACTTTTCAGATCAGCATACAGATGCGCAATATCAATTTTCTCTGATATCTAATTCTGAGAATGAGAATTCTTTCACTATGAAACGCCCATTATTAGAGGGAGATGATAGCCTGAAGAAAGTTGACAGCTTTTCTCGTTGGGTTAGTAAAGAACTTCCAGAGGTGGATGATCTACGTATGCAATCCTCATCTGGTATTTCATGGAGCACAGATGAATGTGGGCATGTTATAGATGATTCTTCATTGAGTCCCTCCCTCTCACATGACCAGCTGTTCAGCATCTATGATTTTTCACCTAAATGGGCTTATGCTGATTCTGAAACTGAGGTTTTGATCATTGGAACATTTTTGAAGAATCAACCAGTGGTGGCAAACTGCAACTGGTCTTGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGATTTTAGCCAATGGAGTTTTGTGTTGTCCTGCTCCACCTCACAAGGCTGGAAGGTTCCCCTTCTATGTAACATGTTCCAATAGGTTAGCTTGCAGTGAAGTGAGGGAATTTGATTACAGAGACGGCTTTGCTAAAGATGTAGAAGTTGAAGATATTTACAGCAGCTCATTTGAAATGCTGGTTTATTTGCGATTGGAAGCTTTACTTTCTTTGAAATCAGTACACCCTTCAAATGACAAGTCATTTGATAATGATGCAGAGAAAAGAAGCTTGATTTATAAGCTTGTTTCATTGAAGGAAGAAGAGGAGTATTTAAATAAGGAAGAGACAGCTTTAGATATGGACATGTCCCAGCAGAAGGTAAAGGAGCAGCAATTTCACAGACAAGTGAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGGCCAAATGTATTAGATGAGGAGGGACAGGGTGTGCTACATCTTACAGCTGCTCTTGGTTATGATTGGGCCATAGCACTGATTATTATTTCTGGAGTTAATATCAATTTCCGGGATGGAAATGGATGGACGGCTCTGCATTGGGCTGCCTCTTGCGGCAGAGAGCGGACAGTTGCTCTTCTTGTCACCATGGGTGCAAACCCTGGAGCAGTGACAGATCCATCTCCAGAATTTCCTTCTGGTAGAACACCTGCAGATCTTGCTTCTAGCAATGGACACAAGGGAATCTCAGGCTTCCTTGCAGAGTCTTCATTAACTAGCCACCTTGCATCTCTCACAATGGATGACCAAAAGAGAGATGGCGGTCAAGAAGCTTCAGGAATGAAAGCAGTACATACTGTTTCGGAACGTTCCATAACACCTTTGTTTTATGGTGATGTACCCGATGCCCTATGCCTTAAGGATTCTCTCACTGCTGTTCGTAATGCTACACAAGCAGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTCCAACGGAAGCAGTTAACTGAGTATAAGGATGATGAGTTTGGACTGTCAGATCCGCGAGCTCTTTCTCTTCTAGGTTCTAAGGCAGGCAAGGCTGGACAGGGAGACGCGTTTGCCCATTCTGCAGCAACACAAATACAGAAGAAGTTTCGTGGCTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGGCACCAGGTAAGGAAGCAATACAAGTCAATCATCTGGTCTGTAGGAATCCTGGAGAAGGTCATATTGCGTTGGAGGCGCAAAGGCAGTGGCTTACGTGGATTTCGACCTGATGCTGCTAACAAGGAACCCGTCCAACCAAGTGAACCTTTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAGGTTCCAGAAGGCCCTTTTGAGGGTAAAGTCCATGGCTCAATATCCTGAAGCACGGGCTCAATATCGACGGCTGCTGAATGTTGTCGAGGACTTCCGTCAGACTAGGGCATGCAATATGGACTTGACCAATTCGGAAGAGACCGTTGATGGTGTGGAGCAGCTGATTGATATTGATATGCTTTTAGATGATAATTTCATGCCTATAGCATTTGATTGA 3120 0.4272 MAERASYGVGHRLDLQQLQYEAQHRWLRPAEICEILRNYRMFQITSEPPNRPTSGSLFLFDRKVLRYFRKDAHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNRTNIVGNTDSDEVTSGNSSSPSPSSGFPINYGNMPSRSTDAMSPASTLTSLCEDADSGDHGQSSISGTNYIPLVQGEKTGGSNVSFVEGQNVHDMASWDRVLDQCSAGLHTDPNLASFASVPPYSVGNILEQEPALGDLLASKGNLAEEAGKSQSFQSNWQIPFEDNSGPLHKWPITQLLSSEYVSDFTTGILEHESHTAGPEIASDVLTVNGQLREQPLQENFSDQHTDAQYQFSLISNSENENSFTMKRPLLEGDDSLKKVDSFSRWVSKELPEVDDLRMQSSSGISWSTDECGHVIDDSSLSPSLSHDQLFSIYDFSPKWAYADSETEVLIIGTFLKNQPVVANCNWSCMFGEVEVPAEILANGVLCCPAPPHKAGRFPFYVTCSNRLACSEVREFDYRDGFAKDVEVEDIYSSSFEMLVYLRLEALLSLKSVHPSNDKSFDNDAEKRSLIYKLVSLKEEEEYLNKEETALDMDMSQQKVKEQQFHRQVKEKLYSWLLHKVAEDGKGPNVLDEEGQGVLHLTAALGYDWAIALIIISGVNINFRDGNGWTALHWAASCGRERTVALLVTMGANPGAVTDPSPEFPSGRTPADLASSNGHKGISGFLAESSLTSHLASLTMDDQKRDGGQEASGMKAVHTVSERSITPLFYGDVPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTEYKDDEFGLSDPRALSLLGSKAGKAGQGDAFAHSAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAANKEPVQPSEPLKEDDYDFLKEGRKQSEERFQKALLRVKSMAQYPEARAQYRRLLNVVEDFRQTRACNMDLTNSEETVDGVEQLIDIDMLLDDNFMPIAFD 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0334 1039 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1002 - -
Lele34g0334 1039 SMART CG_1_2 18 136 IPR005559 GO:0003677
Lele34g0334 1039 Gene3D - 612 764 IPR036770 -
Lele34g0334 1039 SUPERFAMILY Ankyrin repeat 641 749 IPR036770 -
Lele34g0334 1039 ProSiteProfiles IQ motif profile. 887 911 IPR000048 GO:0005515
Lele34g0334 1039 ProSiteProfiles Ankyrin repeat profile. 688 720 IPR002110 GO:0005515
Lele34g0334 1039 Pfam Ankyrin repeats (3 copies) 660 749 IPR002110 GO:0005515
Lele34g0334 1039 SMART iq_5 863 885 IPR000048 GO:0005515
Lele34g0334 1039 SMART iq_5 886 908 IPR000048 GO:0005515
Lele34g0334 1039 Gene3D - 864 911 - -
Lele34g0334 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 914 IPR027417 -
Lele34g0334 1039 Pfam IPT/TIG domain 454 532 IPR002909 -
Lele34g0334 1039 Gene3D Immunoglobulins 447 542 IPR013783 -
Lele34g0334 1039 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Lele34g0334 1039 ProSiteProfiles Ankyrin repeat region circular profile. 688 714 - -
Lele34g0334 1039 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Lele34g0334 1039 MobiDBLite consensus disorder prediction 144 206 - -
Lele34g0334 1039 FunFam Calmodulin-binding transcription activator 2 863 911 - -
Lele34g0334 1039 Pfam IQ calmodulin-binding motif 889 908 IPR000048 GO:0005515
Lele34g0334 1039 Pfam IQ calmodulin-binding motif 865 884 IPR000048 GO:0005515
Lele34g0334 1039 SMART ANK_2a 727 756 IPR002110 GO:0005515
Lele34g0334 1039 SMART ANK_2a 655 684 IPR002110 GO:0005515
Lele34g0334 1039 SMART ANK_2a 688 717 IPR002110 GO:0005515
Lele34g0334 1039 SUPERFAMILY E set domains 454 540 IPR014756 -
Lele34g0334 1039 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Lele34g0334 1039 FunFam Calmodulin-binding transcription activator 2 447 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0334 Lele-ChrLele34 2837709 2853278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0334 1 1039 CAMTA Transcription Factor Family AT5G64220 53.413 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele34g0334 CG-1 2.1e-50 No_clan