Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele34g0328 | ATGATGTGCGAGGGATGTGCAGATAGTGTGAAAAAACTTCTAGAGAGTCGGCCTCAAGTATCATCTGCTAGTGTAAATCTAACAGAAAAAATAGCAACAGTTTGGCCAGCACCTGAAACAAAAACTGAATCAAATTGGCATAATAAATTAGGAGGCAGACTTGCGGAGCATTTAACTAACTGCGGATTCAAGTCGAGCATTCAAGTGGCAGGTCAAGGAGATAGCAACTGA | 231 | 0.4156 | MMCEGCADSVKKLLESRPQVSSASVNLTEKIATVWPAPETKTESNWHNKLGGRLAEHLTNCGFKSSIQVAGQGDSN | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele34g0328 | 76 | SUPERFAMILY | HMA, heavy metal-associated domain | 1 | 45 | IPR036163 | GO:0046872 | |
| Lele34g0328 | 76 | CDD | HMA | 1 | 66 | IPR006121 | GO:0046872 | |
| Lele34g0328 | 76 | Pfam | Heavy-metal-associated domain | 1 | 63 | IPR006121 | GO:0046872 | |
| Lele34g0328 | 76 | Gene3D | - | 1 | 72 | - | - | |
| Lele34g0328 | 76 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 67 | IPR006121 | GO:0046872 | |
| Lele34g0328 | 76 | FunFam | Copper-transporting ATPase PAA1, chloroplastic | 1 | 67 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele34g0328 | Lele-ChrLele34 | 2772197 | 2773659 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele34g0328 | 1 | 70 | Primary Pumps ATPases | AT4G33520 | 60.000 | 3.65e-25 | 91.7 |