Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0320 ATGGGGTTTCCAGGCTTTTTTCTTGAACATGTTCTCCTTGCTGTTCTTCTTGCTGCAGAATTAATGAACACACTTGTCATAGCTCAAGACAGTCCTGCTCTTGATGGTCTCAAGGCCACTTTCAATGACCCTTTTCTGAATAATAACTGGATTGGCTTCCCCTGCAATAAGACTGATCCGTCGAGATGGTTCGGGATTCAGTGTACCAGTGGTCGAGTCACCGGGATAGTAGTGGAAGGTATGGGGCTAACCGGAAAAATCGATGTCAATGCATTCTTCAGCCTTACAGAATTGTCTGTTCTAAGCTTGAAGAGCAATTCCCTGAAGGGAAATGTGATGGATTTCTCCGACAATCATCACTTGAAGTACATTGATTTGTCTGGCAATGAGTTTGATGGGCCAATACCAAGATCCCTTCTGAATCTTAACCTCTTGGAAACATTGTTACTACAAGATAATAAGCTCACAGGTCCGATTCCGGAGTTCAGTCAACCGAGTTTGAAGATGATCAATGTGTCAGGCAATGATCTTCATGGCAGAATCCAAGTAACTCAAACTTTTCGATCACTGGGTCCTCCTTCTCTTAATTCCTTCAGCTCTAGCTTGAAAGCTTCAATTCCAACACCAACAGACAACCTAGAAAATGATGAGGCCCAGAACCAGGATGAATCTTCAAATAAAGACAACACTTCCACTATTCTAATCATTTTCAATGTGGTTCTTCTGTTTGCAATAATCTTGCTAGGTTTTCTTTACTACAAGACAGCTAAAAAGCTCAACAACATTATGAAGCAACAGATTCCCATTAATAAAGACATGGTGGAGAGTACTGTTGACAAGGTCGAAATGAGATCTCGTCACAGTCCAGTAGTGATGGCAGTGGAAGAGAAGAAGGAGCTTATATTCTTTACGGATGAACCAAAGTTTCAAATGAATGAACTCTTAAAAGCATCTGCGGAGGCACTGGGTCAGGGAATCATGGGGAACAGTTATAAGGCTATGCTGAATGGAGGAGTTGCCATTATTGTAAAGAGGCTAAGGGACTTGAAGCCAATGACAAGAGAGGACTTTGCAAAGCAATTGCATGAAATTGCGGATCTGAAGCATCCAAATTTGTTGCCTTTGCTTGCTTACTACAATTCTAGAGATGAGAGGTTGCTGCTCTACAGATATGCAGAGAAGGGAAATCTTTTCTTCAGGCTTCATGGAAACAGAAGTGGAAATCGGATTCCTTTCTCATGGAACTCAAGATTATCAGTGGCAAAAGGGGTAGCTCGAGGATTAACTTACCTTCATCTCAATGCCAAGCCCAACAACACCACCAATGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCCTGCTAGATGAAAACGACACAGTTCTCATCTCTGACTACGGACTTTCCACCCTCATAGCACAACCCATTGTAGCTCAACGCTTGGTCGTTTACAAATCACCCGAATATGGGTACGCAAGAAAAGTATCAAAACAATCTGATGTCTGGAGCTACGGAAGCCTTCTCATAGAACTTTTAACAGGCAGGTTATCTGCATGTTCAGCCCCACCTGGGGTAACCGGGTCGGATCTCTGTAGTTGGGTCCACCGAGCAGTGAGGGAAGAATGGACGGCGGAGATATTCGATAAGGAAATTTCTACGCAGAGAAGTGCACTTCCTGGGATGCTGAGATTGCTTCAGATCGCTATGCGTTGCACCGATAGGTTCCCCGAGAATCGGCCAGATATGAGGGAGGTAGTGAGAGAAGTGGAGAAGATTGAAGTGGTTCCATTGACGTCGGAAGATGAAGAAGATGTATCTGGAGATCGGTCTGTAACAGATGATTCTCTCTACTCAACAAGTACTACTACCTCAGGGATTGTTGGAGATGACAGTAAGGAAATTCTGAGAACGTATGCAAAAGGTTCCAATGTCATGTCTGGAATTTGGGATTTCGGGTATTCTATGTTTGCTGGAGCTTCTATCAGAAGAGGCTGTCGTTATTTTTCCTGCTCATCCAAGAGGGGTAGCTTGTCCTGGTTCCGCGGTCTAGTTGAAAATGTTCCTTCTTTCACATCATCCCCTAGGGAAATCCTGTGCTCCATATCTTCTAATCATGATGTGTGTGTGCATTCAAGAAACTACAGTTTGGCAAGGCATCTCTCAAGATTGGCATCATTACCTTCTTCCTCAGATTTCCTTTTCATTCAGAGATCAAGTATGTCAGCCCAGGGAATTTTTAGGAACTGGCTGCTAGCTAGATATATGAGTAATGTATCATTTGAGCTGAACACAAACAATGATGTTGTAAGGTTCTCTCTGGGCAAGACGCCTCATAATAGTACTAAATCCATGACAAAGGGCAAGAAGAGAAAAGTTAAAATGTCTAGAAAGGCAAAATTGAATGAGCTCAGATTCTATCGTTTGAAGGCTAAAAAGAAGATGAATTCCCCAAATCCAGAAGTGAGGATAAGATATAAGCTTGAGAAGGCCAAGAGAAAGGAAGTCTGGTTGATTGAGAAGCTGCAGAAATTTGAGGTAGCAAAACCCCCAGCAGAAACATATGATCCAGAAATTTTAACAGAGGAAGAGATACATTACCTGAAGCGTACTGGTGAGAAAAAGAAAAACTATGTTCCTGTCGGGAGACGAGGAGTGTTTGGTGGGGTAGTTCTAAACATGCATCTTCATTGGAAGAGGCATGAGACAGTTAAGGTTGTCTGCAAGCCTTGCAAGCCAGGACAGGTTCACGAATATGCTGAAGAGCTTGCCCGGCTGAGCAAGGGCATTGTGATTGACATCAAGCCCAACAATACTATAATTTTCTACCGTGGAAAGAACTATGTGCAGCCAAAAGTAATGTCTCCTCCAGATACACTGTCAAAAGATAAGGCTTTGGAGAAATATAGATATGAGCAGTCACTTGAGCACACCAGCCAGTTCATTGAGAAGTTGGAGAGGGAGCTAGAAGAGTACCATCAGCACCTTGAACGATTTAGAAAAGGGAGAGAAAGCTCCTGA 3018 0.4307 MGFPGFFLEHVLLAVLLAAELMNTLVIAQDSPALDGLKATFNDPFLNNNWIGFPCNKTDPSRWFGIQCTSGRVTGIVVEGMGLTGKIDVNAFFSLTELSVLSLKSNSLKGNVMDFSDNHHLKYIDLSGNEFDGPIPRSLLNLNLLETLLLQDNKLTGPIPEFSQPSLKMINVSGNDLHGRIQVTQTFRSLGPPSLNSFSSSLKASIPTPTDNLENDEAQNQDESSNKDNTSTILIIFNVVLLFAIILLGFLYYKTAKKLNNIMKQQIPINKDMVESTVDKVEMRSRHSPVVMAVEEKKELIFFTDEPKFQMNELLKASAEALGQGIMGNSYKAMLNGGVAIIVKRLRDLKPMTREDFAKQLHEIADLKHPNLLPLLAYYNSRDERLLLYRYAEKGNLFFRLHGNRSGNRIPFSWNSRLSVAKGVARGLTYLHLNAKPNNTTNAPHGNLKSSNVLLDENDTVLISDYGLSTLIAQPIVAQRLVVYKSPEYGYARKVSKQSDVWSYGSLLIELLTGRLSACSAPPGVTGSDLCSWVHRAVREEWTAEIFDKEISTQRSALPGMLRLLQIAMRCTDRFPENRPDMREVVREVEKIEVVPLTSEDEEDVSGDRSVTDDSLYSTSTTTSGIVGDDSKEILRTYAKGSNVMSGIWDFGYSMFAGASIRRGCRYFSCSSKRGSLSWFRGLVENVPSFTSSPREILCSISSNHDVCVHSRNYSLARHLSRLASLPSSSDFLFIQRSSMSAQGIFRNWLLARYMSNVSFELNTNNDVVRFSLGKTPHNSTKSMTKGKKRKVKMSRKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEVWLIEKLQKFEVAKPPAETYDPEILTEEEIHYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKRHETVKVVCKPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPKVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLERELEEYHQHLERFRKGRESS 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0320 1005 SMART CRS1_YhbY_2 859 943 IPR001890 GO:0003723
Lele34g0320 1005 ProSiteProfiles CRM domain profile. 857 954 IPR001890 GO:0003723
Lele34g0320 1005 MobiDBLite consensus disorder prediction 200 226 - -
Lele34g0320 1005 Gene3D Phosphorylase Kinase; domain 1 282 391 - -
Lele34g0320 1005 MobiDBLite consensus disorder prediction 200 215 - -
Lele34g0320 1005 Gene3D - 858 956 IPR035920 -
Lele34g0320 1005 ProSiteProfiles Protein kinase domain profile. 316 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0320 1005 SUPERFAMILY YhbY-like 858 953 IPR035920 -
Lele34g0320 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 593 - -
Lele34g0320 1005 Coils Coil 974 1001 - -
Lele34g0320 1005 SUPERFAMILY L domain-like 49 190 - -
Lele34g0320 1005 Pfam Protein tyrosine and serine/threonine kinase 320 588 IPR001245 GO:0004672|GO:0006468
Lele34g0320 1005 Gene3D Ribonuclease Inhibitor 29 200 IPR032675 -
Lele34g0320 1005 Gene3D Transferase(Phosphotransferase) domain 1 393 615 - -
Lele34g0320 1005 SUPERFAMILY Protein kinase-like (PK-like) 320 596 IPR011009 -
Lele34g0320 1005 Pfam CRS1 / YhbY (CRM) domain 859 943 IPR001890 GO:0003723
Lele34g0320 1005 SMART serkin_6 316 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0320 Lele-ChrLele34 2700665 2707660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0320 44 592 Receptor kinase-like Gene Family AT3G02880 35.008 5.98e-92 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele34g0320 PK_Tyr_Ser-Thr 4.3e-28 CL0016