Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0301 ATGGCCAAGTCCGGTTTATTTGTCTCAGATTCTGTAGTACGTCTAGGTGTTTCATGGCCTGCTTCCGTATTTTTTCCAGAACTCTATGTGAACGTTCCAAAGACAAAGAAGACTTACTGCAAGAATAAGGAGTGCAAGAAGCACACCTTGCACAAGGTCACACAGTACAAGAAGGGAAAGGATTCCCTTGCAGCTCAGGGAAAGCGCCGTTATGACCGTAAACAGTCAGGGTATGGTGGGCAGACGAAGCCTGTGTTCCACAAAAAGGCTAAAACCACCAAGAAGATTGTCTTGAGGCTGCAATGCCAGAGTTGCAAACATGTATCCCAACATGCTATTAAGAGGTGCAAGCACTTCGAGATCGGAGGGGATAAGAAGGGGAAGGGAACTTCTCTGTTTTAA 402 0.4602 MAKSGLFVSDSVVRLGVSWPASVFFPELYVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0301 133 MobiDBLite consensus disorder prediction 58 84 - -
Lele34g0301 133 SUPERFAMILY Zn-binding ribosomal proteins 30 122 IPR011332 GO:0006412
Lele34g0301 133 Gene3D - 29 133 - -
Lele34g0301 133 MobiDBLite consensus disorder prediction 58 76 - -
Lele34g0301 133 FunFam 60S ribosomal protein L44 29 133 - -
Lele34g0301 133 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 30 133 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele34g0301 133 Pfam Ribosomal protein L44 47 122 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele34g0301 133 ProSitePatterns Ribosomal protein L44e signature. 91 102 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0301 Lele-ChrLele34 2496861 2499268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0301 30 133 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 95.192 2.60e-68 199