Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0296 ATGGTAGAGAGCGTTGTTAGTTTTGTGCTGGAGAACTTGTCTCGGCTTGTGGCACATGAAGCCAATTTGCTATGTGGCGTGGAGGATAAAGTTAAGTCCCTTGAGAGTGAGCTCAGAATGATGACTGTCTTCCTCAAGAGCTGCGAGCAGAACCAGCGGAAGAAGGAAATCGAAAAAGAGGTGGTCCGTCAAATCACGGACGTCGCACATGAAGCTGAGGATGTCATCGACAACTTTGTCGCCAACGTTGCCAATCACCGAAGGAGAAGTTGGTTGTCCAGGATGCTCCATGGTGTTGACCATGCAAAGCTTCTGCACCATGTGGCAGAAAAAATAGACAACATTAAAGCTACCATCGATCACATTTGTGAGAACCGAATCAAATACGACACCCAGGAAGCAGCAGGATCTTCAACAGAGGAGTTACAACTACTGCACAGGCGAAGAAGGGAAGTGGAGGAAGATGACGTGGTGGGTTTTCAGCTTGACACAACTGAAGTAATCAATCGGCTCAAGCAAGGGGGTTCGCGTCGTAATGTGGTGTCCGTCATCGGTATGGGTGGATTAGGTAAAACTACTCTTGCCCGTAAGATTTATAAGAGTGATCATGTCAAGAATTACTTTGATTGTCATGCTTGGGTTTATGTGTCTAATGACTACAGACCTAGAGAGCTTTTGCTAGCCCTTCTTAAATGCTTCATGTCAATCTCTGCAAATAGCAGTAGCATGCATAAGAAGAAATCAAAGGGCAAAAGCAAAGCTGAATCTGATGATTTCTATAGTTTGAGTGAAAAAGAACTGAAAGACAAGGTACGAGAGTGTTTGAAAGGGAAGAGGTATCTTGTAGTGTTGGATGACATATGGAATCCTCAACATTGGGATGGCCTACAATATGCTTTTCCTGATGACAATAAAAGCAGTAGGATCCTGATCACTAGTCGTTTGAAAGAGGTGGCTTCTCATGCCAGCTCATCTCCTCCCTACTATCTCCCTTTTCTTACTGAAGAAGAAAGTTGGGAGCTTTTCTCAAAAAGGGTGTTTCAAGGTGAAGGCGTGCCTTCTGATCTCGAGCTAGTAGGTAAGCGAATGGTAAAAAGTTGTGGTGGCTTGCCAATATCCATTGTGGTACTTTCAGGAATTCTAGCAAACAAGGATAAGTCATACCGAGAATGGTCCAAGATCATGGGCCATGTCAACTCGTATCTCACTCGACCAGAAACACAAGTGCACGACATAGTACTTAAACTCAGTTATGATAGCTTGCCTCCAAGATTGAGGCCATGCTTTCTATATTTTGGTATGTTTCCAGAAGACTATGAGATTCCTGTTAGACGCTTGATCCAGTTATGGGTTGCTGAAGGATTCATTCTTCAGAGTGATTCTAGAATTGCAGAGGATATTGCAGAGGACTACTTGGATGAGCTCATTAATCGTAGCTTAATCCAAGTGGGGAGAAGGAGAAGTGACGGGGGAATCAAGACTTGTCGCATCCATGATCTTCTAAGAGAACTTTGCATATCTGAGAGCAAGGAGGAGAAGGTTTTTGAAATTTGTAGGGATGTAGACATTTTGGAGCAAACCAAACCTCGCAGGCTATCCATTCAATGTAATATGTCTGATTTTTTTGTTTCAAGCTACAAAGATGTTTCGGGCACTCGTTCTATGCTCTGCTTTGACCGGGACTCCTACTACCACCTTGATTCAAGAAAGTCAGAAGGGCTAGTGAAATGCTTTCAACTTGTTCGAGTATTGGATCTAGGGCTTCCATGTTCATGTGAGTTTAAGCTCCCAACCAATTTAAACACGTTAGTGCATCTAAGGTATTTAAGAATAGACCTGGAAACAAGTTTCTATAGAGGATTTGTCAGAGCGATTCCTAAATTCATATGCAATCTTTGGAATCTAGAAACTTTGGACTTAGGGCATTCTCAATCTGTAATATCCATACCTGTCTCTAGTGGGATGTGGAAGCTTAAGAGACTGAGGCATCTTCATACGACTGGACCTGTGATTTTACTTGAGTTTCCAGAAGTAGAAACTAAAACCATGTGGAATCTACAAACCTTATCTTGTGTTGCCGTAAACAAAAAATCAGCCGTTGCCTCTCTAATAGGGAAAGGTGTATTCCCAAAGCTTGGGACATTGGGATTGCATTTTTAGGTATTTGAAATGATACATCTGAAGAAGCTCCATCACTGGGAATTAGGTAAAGATGTAATGCCATGTCTTAGACGTTTGATCATTATAGAGTGCTGGAGGTTGACTGCTCTCCCTGATGAGCTATGGTCCCTGACTTCCTTAAGTGAGAAACAAGAAGAAAATTCACGCACAGAGAATGCGGAAGTAGTAGCCCCACATAAATCAACCAAAGATCCTTTGGTTAAAGACCAGCAGCTACATCTGCACAACAAAAACCATCACAGGATGGCAGACATAAAAGAGGGTTTGGTCAAGTTTGGGAAGGCCTCCAACACCTAA 2478 0.4278 MVESVVSFVLENLSRLVAHEANLLCGVEDKVKSLESELRMMTVFLKSCEQNQRKKEIEKEVVRQITDVAHEAEDVIDNFVANVANHRRRSWLSRMLHGVDHAKLLHHVAEKIDNIKATIDHICENRIKYDTQEAAGSSTEELQLLHRRRREVEEDDVVGFQLDTTEVINRLKQGGSRRNVVSVIGMGGLGKTTLARKIYKSDHVKNYFDCHAWVYVSNDYRPRELLLALLKCFMSISANSSSMHKKKSKGKSKAESDDFYSLSEKELKDKVRECLKGKRYLVVLDDIWNPQHWDGLQYAFPDDNKSSRILITSRLKEVASHASSSPPYYLPFLTEEESWELFSKRVFQGEGVPSDLELVGKRMVKSCGGLPISIVVLSGILANKDKSYREWSKIMGHVNSYLTRPETQVHDIVLKLSYDSLPPRLRPCFLYFGMFPEDYEIPVRRLIQLWVAEGFILQSDSRIAEDIAEDYLDELINRSLIQVGRRRSDGGIKTCRIHDLLRELCISESKEEKVFEICRDVDILEQTKPRRLSIQCNMSDFFVSSYKDVSGTRSMLCFDRDSYYHLDSRKSEGLVKCFQLVRVLDLGLPCSCEFKLPTNLNTLVHLRYLRIDLETSFYRGFVRAIPKFICNLWNLETLDLGHSQSVISIPVSSGMWKLKRLRHLHTTGPVILLEFPEVETKTMWNLQTLSCVAVNKKSAVASLIGKGVFPKLGTLGLHFXVFEMIHLKKLHHWELGKDVMPCLRRLIIIECWRLTALPDELWSLTSLSEKQEENSRTENAEVVAPHKSTKDPLVKDQQLHLHNKNHHRMADIKEGLVKFGKASNT 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0296 825 SUPERFAMILY L domain-like 488 768 - -
Lele34g0296 825 Gene3D - 137 326 IPR027417 -
Lele34g0296 825 Pfam Rx N-terminal domain 5 89 IPR041118 -
Lele34g0296 825 Gene3D - 418 508 IPR036388 -
Lele34g0296 825 PRINTS Disease resistance protein signature 180 195 - -
Lele34g0296 825 PRINTS Disease resistance protein signature 367 381 - -
Lele34g0296 825 PRINTS Disease resistance protein signature 630 646 - -
Lele34g0296 825 FunFam Probable disease resistance protein At1g63360 418 507 - -
Lele34g0296 825 Gene3D - 332 417 IPR042197 -
Lele34g0296 825 CDD RX-CC_like 3 122 IPR038005 -
Lele34g0296 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 432 IPR027417 -
Lele34g0296 825 PANTHER DISEASE RESISTANCE PROTEIN RP 31 768 IPR044974 GO:0006952
Lele34g0296 825 Gene3D Ribonuclease Inhibitor 573 778 IPR032675 -
Lele34g0296 825 Pfam NB-ARC domain 165 418 IPR002182 GO:0043531
Lele34g0296 825 FunFam Probable disease resistance protein At1g61300 140 326 - -
Lele34g0296 825 Gene3D - 5 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0296 Lele-ChrLele34 2438403 2441706 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0296 181 514 WRKY Transcription Factor Family AT5G45050 24.501 4.05e-10 62.0