LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele34g0282	ATGGCGTCGTCGAAGTTGGTCACGACGAATCCGGATCTGCTACGCCAATCTTCTATCTGTTCCCTTTCTTCTATTCTCGCTGACCTCCAGAACAACACTAACAACACCAACACCAACACCAATAACACTAATAACCACAACGAGCCCGGCGCCGACGACCCTTCCAAGGCCATGGGTTCTATGAGCATGGATGATCTCCTCAAGTCCATTTACTCTTCTTCATCCGATCCCAATAACAATCCCAGCCCAGCGCACCTCTCGTCTGACCCCAATTTCCACGCGGCTGCTGCTGCGGCGGAATTGGGCACCAAGACCGCCGATGAGGTGTGGCAGGAGATGGTGGAGGGTGGGGATCAGAGGCGGATGGGTGCAGGAGAGGGTTTGGAGGCCATGACTTTGGAGGATTTCTTGGCCAAGGCTGGGGCTGTAAGAGAGGAGGATGTCAGAGGGGTTCCTACCGTAGTACCTGGCCATGCGAGTTTCCGTGTAGATGCATCGGCTGCGGCAGCAGGCGCCATCAACGGTGGCACTCAGTTCCCGATGCCACCGCCGGTGCAGGGTATGGAAGGGTCTTCCATAGAGGTTTTTGGAAACGGGATTGACCGGACAGTTGTGGGAGTTTCCGCATCAGCGGGAAGAGGGAAGCGAAGGGTTGTGGAGGAACCCGTTGATAAGGCTACGCTTCAGAAGCAGAGAAGGATGATAAAAAACAGAGAGTCCGCGGCCAGGTCCAGAGAACGCAAGCAGGCTTACACAGTTGAACTAGAGACTATGGTAACACAGCTCAAGGCAGAGAATGCACAACTATTGAGAGAAATGGCTGAAAAGAAGAAGCAGAGGTTCAAGCAGCTCATGGAAAACCTTATTCCATTGGTGAAGCGTAGACCACAACGAAAGATTCGGAGAGTGAATTCAGCCCAGTGGTGA	927	0.534	MASSKLVTTNPDLLRQSSICSLSSILADLQNNTNNTNTNTNNTNNHNEPGADDPSKAMGSMSMDDLLKSIYSSSSDPNNNPSPAHLSSDPNFHAAAAAAELGTKTADEVWQEMVEGGDQRRMGAGEGLEAMTLEDFLAKAGAVREEDVRGVPTVVPGHASFRVDASAAAAGAINGGTQFPMPPPVQGMEGSSIEVFGNGIDRTVVGVSASAGRGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTVELETMVTQLKAENAQLLREMAEKKKQRFKQLMENLIPLVKRRPQRKIRRVNSAQW	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele34g0282	308	MobiDBLite	consensus disorder prediction	33	50	-	-
	Lele34g0282	308	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	228	284	-	-
	Lele34g0282	308	CDD	bZIP_plant_BZIP46	229	271	-	-
	Lele34g0282	308	Pfam	bZIP transcription factor	226	286	IPR004827	GO:0003700\|GO:0006355
	Lele34g0282	308	SUPERFAMILY	Leucine zipper domain	229	279	IPR046347	GO:0003700\|GO:0006355
	Lele34g0282	308	MobiDBLite	consensus disorder prediction	33	89	-	-
	Lele34g0282	308	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	15	304	IPR043452	GO:0003700\|GO:0045893
	Lele34g0282	308	MobiDBLite	consensus disorder prediction	66	87	-	-
	Lele34g0282	308	Gene3D	-	228	287	-	-
	Lele34g0282	308	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	227	279	IPR004827	GO:0003700\|GO:0006355
	Lele34g0282	308	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	232	247	IPR004827	GO:0003700\|GO:0006355
	Lele34g0282	308	SMART	brlzneu	225	289	IPR004827	GO:0003700\|GO:0006355
	Lele34g0282	308	Coils	Coil	252	287	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele34g0282	Lele-ChrLele34	2346585	2350822	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele34g0282	50	308	bZIP Transcription Factor Family	AT5G44080	39.373	5.76e-45	153

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele34g0282		bZIP_1	4.1e-14	CL0018