Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0277 ATGGACGCCGCGAAGCGCAAGCGCGGGAAGCCCAAGCTCGAGCGTCGAAACGCCATGAAGAACATCGATTACCAAGTTCCCGCTTCCTTAGCTTCCTCTTTTGATGATTCCTCCTCCCTCGATCTTTCATCTTCCCTCGACAAACAAACCAGCATTCGTGTCCAGGGCGTCGATGGAGAATTCGAATTGATTTTCCGTAGCCTCGGGCTTTCTGGCCCGGACGACTTCTCCATTCCTGTTGATGATTGGGAGGCCCAAAGGTCTCGCTATAGTTTAAGTGCTAAATCGCCGGAAAAGAAGGTGGAGAATGTGAAATCGGTGAAACTTGAATCTAGGGTTTCGATTAAGAGTGATATTGAAGAGCCCCGTGATGAAGGGCAGCTCGGGAAGAGGGATGTTCCTTCTGATTCGAAGCCTCTTGGGGGTGGGGGAATCAAGGGTGCCAGGCCTCCTGTCCTTTCAACGCCGCCGGTGGTGCTGCCGCCGATGGTTGATGACGGGAGATCTACCTGGGATTTAGTGAGGTCTTTATCAGATGGTGTTATTGATAATGATTCACCGATTCGTGATGGGGGAATCAGTTCTTCCGGTGAGGAAGACGAAGGGCGCGTCGAGGAAAATGAAGGTGGTGATCAAGGAATTGATGTTGAGGAAGAATCACATAGTGCGAGACATAGGGAAAGCAATCTTCTTTCAGATTCTTGTTCTTCTACGTCCCGTGACGACGAAGAAAGTGATGCTGCAGGTCATCAGGTTTCTGGTGAGGTTGACGAATCGGTTTACAATGTCTCTCCACACGGTTCATTTAGACGCATGTTTAAGTCTTGGCAAAAGGGTGAGATTTTGGGGAAGGGATCATTTGGAACGGTGTATGAAGGCTTCACAGATCCATTTTCCTTTTCCTGCAGTGATGGATTCTTTTTTGCCGTAAAGGAAGTGTCTTTGCTAGATCATGGAGCCCAAGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATATCTTTTGAGTCAATTTGAACACGAGAACATTGTTCGATATCTTGGCACAGACAGGGATAAAAATATGCTATACATCTTCCTTGAGCTTGTAACCAAAGGGTCTTTGGCAAGACTCTATCAAAAGTATCGTCTAAGGGACTCTCAAGTTTCTTCGTACACAAGGAAGATTTTGAGCGGTTTAAAGTATCTTCATGATCGCAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGGTCAGTAAAGCTTGCTGATTTTGGGCTAGCCAAGGCAACCACTATGAATGATGTTAAATCAAGCAAAGGCTCCCCGTATTGGATGGCCCCTGAGGTTGTAAATCTAAGAAGCCGTGGTTATGGCCTAGCAGCTGATATATGGAGCTTGGGATGCACAGTTTTGGAGATGTTGACTCGCCAGCCTCCTTACTCTCATTTGGAAGGCATGCAAGCTTTATTTCGGATTGGTAGAGGTGAACCTCCACCTGTGCCAGAATCTTTATCAAAAGATGCCCGAGATTTCATTCTCAAGTGCCTGCAAGTTAACCCTAGTAAGAGGCCAAATGCAATCCAGCTATTGGACCATCCATTTGTAAAGAGGCCATTTCTATCTCCTCTGAGTCCTGCTTCTCCGCATATTAATAATTTAAGGCTAGAAGCCAATGAGAGCTTGTCAAAGTGGGTGTTCAGATATTTACTGAACTGGGCATTTCAATATTCAGCTAGTTTGACTATAATCTTACCTACCATGCTGGTCTCTGGTGAAGATCAATTTGCCCAAGGGTCAGATCAAGAACTCGTGTATGTGATTGCTTTTGCTTATAACTTACGCAGTCTCAAGTGA 1857 0.4572 MDAAKRKRGKPKLERRNAMKNIDYQVPASLASSFDDSSSLDLSSSLDKQTSIRVQGVDGEFELIFRSLGLSGPDDFSIPVDDWEAQRSRYSLSAKSPEKKVENVKSVKLESRVSIKSDIEEPRDEGQLGKRDVPSDSKPLGGGGIKGARPPVLSTPPVVLPPMVDDGRSTWDLVRSLSDGVIDNDSPIRDGGISSSGEEDEGRVEENEGGDQGIDVEEESHSARHRESNLLSDSCSSTSRDDEESDAAGHQVSGEVDESVYNVSPHGSFRRMFKSWQKGEILGKGSFGTVYEGFTDPFSFSCSDGFFFAVKEVSLLDHGAQGKQSIFQLQQEIYLLSQFEHENIVRYLGTDRDKNMLYIFLELVTKGSLARLYQKYRLRDSQVSSYTRKILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATTMNDVKSSKGSPYWMAPEVVNLRSRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEPPPVPESLSKDARDFILKCLQVNPSKRPNAIQLLDHPFVKRPFLSPLSPASPHINNLRLEANESLSKWVFRYLLNWAFQYSASLTIILPTMLVSGEDQFAQGSDQELVYVIAFAYNLRSLK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0277 618 SMART serkin_6 276 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0277 618 MobiDBLite consensus disorder prediction 207 228 - -
Lele34g0277 618 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 81 540 - -
Lele34g0277 618 MobiDBLite consensus disorder prediction 112 132 - -
Lele34g0277 618 Pfam Protein kinase domain 277 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0277 618 ProSitePatterns Protein kinases ATP-binding region signature. 282 311 IPR017441 GO:0005524
Lele34g0277 618 Gene3D Transferase(Phosphotransferase) domain 1 274 561 - -
Lele34g0277 618 MobiDBLite consensus disorder prediction 1 21 - -
Lele34g0277 618 SUPERFAMILY Protein kinase-like (PK-like) 273 570 IPR011009 -
Lele34g0277 618 ProSiteProfiles Protein kinase domain profile. 276 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0277 618 FunFam Mitogen-activated protein kinase 1, putative, expressed 274 548 - -
Lele34g0277 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Lele34g0277 618 MobiDBLite consensus disorder prediction 237 251 - -
Lele34g0277 618 MobiDBLite consensus disorder prediction 112 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0277 Lele-ChrLele34 2279717 2284616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0277 12 91 MAP Kinase Kinase Kinase AT4G08500 44.706 1.88e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele34g0277 Pkinase 9.4e-66 CL0016